Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_1400 |
Symbol | |
ID | 5336478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 820104 |
End bp | 820628 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | 16S rRNA processing protein RimM |
Protein accession | YP_001361152 |
Protein GI | 152965368 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00457936 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGGAGTACG TCGTCGCCCG TGTCGGGCGA CCCCACGGCG TTCGCGGTGA GGTGACCGTC GAGGTCCGCA CCGACGACCC GGACACCCGC TTCGCCCCCG GCGCGGTGCT GCGCACCGAC CCCGACCGCG GCCCGCTCAC GGTCGCCACG GCGCGCTGGC ACAACGGGAC CCTGCTGCTC ACCTTCCAGG GGGTCGAGGA CCGCACGGCC GTCGAGGGGC TGCGCAACAC CCGCCTCGTC GTGGACCTCG ACGACGAGGC CGACCCCGAC GACGACGCCT GGTACCCCCA CCAGCTCCAG GGCCTGGCGG CGGTCACCAC GACGGGCACC CCCCTGGGGA CGGTCAAGGA CCTGCTCACC GGGGGCGCGC AGGACGTCCT CGTGGTCACC GGGACCGACG GGCGGGAGGT CCTCGTCCCC TTCGTCACCC CCCTCGTCCC GCGGGTGGAC GTGAAGCGCG GGAAGGTCGT GCTCAGCCCG CCGGGCGGGT TGTTCGTCGA GCTGCCCGGG GAGCCCGAGG AGTGA
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Protein sequence | MEYVVARVGR PHGVRGEVTV EVRTDDPDTR FAPGAVLRTD PDRGPLTVAT ARWHNGTLLL TFQGVEDRTA VEGLRNTRLV VDLDDEADPD DDAWYPHQLQ GLAAVTTTGT PLGTVKDLLT GGAQDVLVVT GTDGREVLVP FVTPLVPRVD VKRGKVVLSP PGGLFVELPG EPEE
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