| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_1335 |
|---|
| Symbol | |
|---|
| ID | 5336126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | - |
|---|
| Start bp | 890690 |
|---|
| End bp | 892525 |
|---|
| Gene Length | 1836 bp |
|---|
| Protein Length | 611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | acetolactate synthase 1 catalytic subunit |
|---|
| Protein accession | YP_001361087 |
|---|
| Protein GI | 152965303 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.558483 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.552773 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACAGC AACTGCCCCT GGACCCGAAG CTCCCCGTCG CCGAGCTCAC CGGCGCGCAG
AGCCTCATCC GTTCGCTGGA GGCGGTAGGG GTCGAGGTCG TCTTCGGTCT GCCCGGGGGC
GCGATCCTGC CCGCCTACGA CCCGCTGATG GACTCCCCGC ACGTCCGGCA CGTCCTGGTG
CGCCACGAGC AGGGCGCCGG CCACGCCGCC GAGGGCTACG CGGTGGCCAC CGGCAAGGTC
GGCGTCTGCA TGGCCACCTC GGGCCCGGGG GCGACGAACC TCGTCACCCC CATCGCCGAC
GCCAACATGG ACTCCGTCCC GATGGTCGCG ATCACCGGTC AGGTGGCCGC CAAGGCCATC
GGCACCGACG CGTTCCAGGA AGCCGACATC GCCGGCATCA CCATCCCGAT CACCAAGCAC
AACTACCTGG TGACCGACCC GGCCGACATC CCCCGCGTGA TCGCCGAGGC CTTCCACCTC
GCCGCCACCG GGCGCCCCGG CCCCGTCCTC GTCGACGTCG CGAAGTCCGC GCTGACGGCG
ACGACCTCCT TCGCCTGGCC CGAGACGGTC GACCTGCCCG GCTACCGCCC GGTGACGCGC
CCGCACGGCA AGCAGATCCG CGAGGCCGCC CGGCTCATCG CCGCGGCCGA GCGCCCCGTC
CTCTACGTCG GCGGCGGCGT CATCAAGGCC GACGCCTCCG CGGAGCTGGC GGCGCTGGCC
GACCTCACCG GCATCCCCGC CGTCACGACC CTGATGGCCC GCGGCGCGCT GCCGGACTCC
CACCCGAACA ACCTGGGCAT GCCCGGCATG CACGGGACGG TCGCGGCCGT GACCGCGCTG
CAGAAGTCCG ACCTGCTCAT CACCCTCGGC GCCCGCTTCG ACGACCGCGT CACCGGCGAG
CTGTCCAGCT TCGCCCCCGG CGCCAAGGTC ATCCACGCCG ACATCGACCC GGCCGAGATC
GGCAAGAACC GCGCCGTCGA CGTCCCGATC GTGGGCGACG CCAAGCTCGT CATCGCCGAG
CTCACCACGG CCGTGGCCGC CGAGTTCGAG AACGGCCGCG CGGACCTCAC GGCCTGGACC
GCCCTGACGC AGTCGTGGAA GGAGACGTAC CCGCTGGGCT ACGCCGAGTC CGACGACGGC
ACGCTCGCCC CGCAGCACGT CATCGCCCGG ATCGGGGCGA TCGCCGGGCC CGAGGCCATC
TACGTCTCCG GGGTCGGCCA GCACCAGATG TGGTCCGCGC AGTTCGTCCA GTACGAGAAC
CCGCGCACCT GGCTCAACTC CGGCGGCCTG GGGACCATGG GCTACGCGGT CCCCGCGGCC
ATGGGCGCCA AGGTGGGCAA GCCCGACACC GTCGTGTGGG CCATCGACGG CGACGGCTGC
TTCCAGATGA CCAACCAGGA ACTGGCGACC TGCACCCTCA ACGGGATCCC CGTCAAGGTC
GCGATCATCA ACAACTCCAG CCTGGGCATG GTCCGGCAGT GGCAGACGCT CTTCTACTCC
GAGCGCTACT CCAACACCGA CCTGAACTCC GGCGACCACC ACGGCACCCA CGCCGCGCCG
ATCCCCGACT TCGTCAAGCT CGCCGAGGCC TACGGCTGCG TGGGGCTGCG CTGCGACCGG
GCCGAGGACG TCGACGCGAC GATCGAGAAG GCCATGGCGA TCGACGACGT GCCCGTGGTC
ATCGACTTCC GCGTCCACCG CGACGCCATG GTCTGGCCCA TGGTCGAGGC CGGCGTGAGC
AACGACGCCA TCCAGTACGC GCGGGGGGTC TCCCCGGTCT GGGACCGCGA GGAAGAGGGC
GACAACGAGT CCGGTCCCGA GAAGGTGATC TCCTGA
|
|---|
| Protein sequence | MPQQLPLDPK LPVAELTGAQ SLIRSLEAVG VEVVFGLPGG AILPAYDPLM DSPHVRHVLV
RHEQGAGHAA EGYAVATGKV GVCMATSGPG ATNLVTPIAD ANMDSVPMVA ITGQVAAKAI
GTDAFQEADI AGITIPITKH NYLVTDPADI PRVIAEAFHL AATGRPGPVL VDVAKSALTA
TTSFAWPETV DLPGYRPVTR PHGKQIREAA RLIAAAERPV LYVGGGVIKA DASAELAALA
DLTGIPAVTT LMARGALPDS HPNNLGMPGM HGTVAAVTAL QKSDLLITLG ARFDDRVTGE
LSSFAPGAKV IHADIDPAEI GKNRAVDVPI VGDAKLVIAE LTTAVAAEFE NGRADLTAWT
ALTQSWKETY PLGYAESDDG TLAPQHVIAR IGAIAGPEAI YVSGVGQHQM WSAQFVQYEN
PRTWLNSGGL GTMGYAVPAA MGAKVGKPDT VVWAIDGDGC FQMTNQELAT CTLNGIPVKV
AIINNSSLGM VRQWQTLFYS ERYSNTDLNS GDHHGTHAAP IPDFVKLAEA YGCVGLRCDR
AEDVDATIEK AMAIDDVPVV IDFRVHRDAM VWPMVEAGVS NDAIQYARGV SPVWDREEEG
DNESGPEKVI S
|
|---|
| |