| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_1319 |
|---|
| Symbol | gatB |
|---|
| ID | 5335921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | - |
|---|
| Start bp | 913906 |
|---|
| End bp | 915423 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
|---|
| Protein accession | YP_001361071 |
|---|
| Protein GI | 152965287 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0674218 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.16413 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGTCG AACTGGTCGA CTACGACGAG GCGGTCGCGG AGTTCGACCC CGTCCTCGGG
CTCGAGGTGC ACGTCGAGCT GAACACCGCG ACGAAGATGT TCTCCGGGTC GCCCACGGAG
TTCGGCGCCG AGCCGAACAC CCAGGTCGAC CCGACCTCCC TGGGTCTGCC GGGCGCCATG
CCGGTGCTCA ACGCCAAGGC GCTGGAGTCG GCGATCCGGA TCGGGCTGGC GCTGAACTGC
TCCATCGCCG AGCGCTGCAG GTTCGCCCGG AAGAACTACT TCTACCCGGA CATGCCCAAG
AACTTCCAGA CCTCGCAGTA CGACGAGCCG ATCGCCTTCG ACGGGTACCT CGACGTCGAC
GTCCCGGCCA GCGAGGACGG GACGAAGCCG GCCTTCACCT ACCGGGTGCT CATCGAGCGC
GCCCACATGG AGGAGGACAC CGGCAAGTCG CTGCACGTCG GCGGCTCCAC CGGGCGCATC
CACGGCGCGG AGTTCTCCCT CGTCGACTAC AACCGCGCCG GGATCCCGCT CATCGAGATC
GTCACCCGGC CCCTGGAGGG CACCGGGGAC CGCGCGCCCG ACGTGGCCCG CGCCTACGTC
GCCGCCCTGC GCGACGTGCT GCGCTCCCTC GACGTCTCCG ACGTCAAGAT GGAGCAGGGC
TCGCTGCGCT GCGACGTGAA CCTGTCGCTG CGCCCGACGC CGCAGTCCCC GCTGGGGACG
CGGTCGGAGA CGAAGAACGT CAACTCGCTG CGCTCGGTCG AACGGGCCGT CCGCTACGAG
GTCTCCCGCC ACGCTGCCGT CCTGCGCTCG GGCGCGAAGG TCGTCCAGGA GACCCGGCAC
TGGCACGAGG ACACCGGCCT GACGACCTCG GGCCGGGAGA AGTCCGACGC CGAGGACTAC
CGGTACTTCC CCGAGCCGGA CCTCGTGCCC ATCGTCCCGG ACCGGGCGTG GGTCGAGGAG
CTGCGGGCGG CGCTGCCGGA ACCCCCGGCC CAGCGCCGCA AGCGGCTGCA CGCCGAGTGG
GGCTTCTCCG ACCTGGAGTT CCGCGACCTC GTCAACGCCG GGGCCATCGA CCTCGTCGAG
GCCACCGTCG CCGCCGGCGC CTCGCCCGCC GCGGCGCGCA AGTGGTGGTC CGGTGAACTG
GCCCGCCGCG CCAACGCCGA CGGCGTCGAG CTCTCCGCCC TCGCGGTGGG CCCGGCCGAC
GTCGCCGAGC TGGCCGCGCT GGTCGAGGCG GGCAAGCTCA CCGACCGCCT GGCGCGCGAG
GCGCTGGAGG GCGTCCTCGC CGGCGAGGGG TCGGTGGCCG AGGTCGTCGA GGCGCGCGGC
CTGGTCGTCG TGCAGGACGA CGGCGCGCTG GTCGCCGCGG TCGAGAAGGT CCTCGCCGCC
AACCCCGACG TCGTGGAGAA GATCCGCGGC GGCAAGGCGC AGGCCGCGGG GGCGCTCATC
GGCCAGGTCA TGAAGGAGAT GCGCGGCAAG GCCGACGCCG CCCGGATCCG CGAGTTGGTG
CTGGAGCGCG TGGGCTGA
|
|---|
| Protein sequence | MSVELVDYDE AVAEFDPVLG LEVHVELNTA TKMFSGSPTE FGAEPNTQVD PTSLGLPGAM
PVLNAKALES AIRIGLALNC SIAERCRFAR KNYFYPDMPK NFQTSQYDEP IAFDGYLDVD
VPASEDGTKP AFTYRVLIER AHMEEDTGKS LHVGGSTGRI HGAEFSLVDY NRAGIPLIEI
VTRPLEGTGD RAPDVARAYV AALRDVLRSL DVSDVKMEQG SLRCDVNLSL RPTPQSPLGT
RSETKNVNSL RSVERAVRYE VSRHAAVLRS GAKVVQETRH WHEDTGLTTS GREKSDAEDY
RYFPEPDLVP IVPDRAWVEE LRAALPEPPA QRRKRLHAEW GFSDLEFRDL VNAGAIDLVE
ATVAAGASPA AARKWWSGEL ARRANADGVE LSALAVGPAD VAELAALVEA GKLTDRLARE
ALEGVLAGEG SVAEVVEARG LVVVQDDGAL VAAVEKVLAA NPDVVEKIRG GKAQAAGALI
GQVMKEMRGK ADAARIRELV LERVG
|
|---|
| |