Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_1249 |
Symbol | |
ID | 5335099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 993658 |
End bp | 994344 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | protein of unknown function DUF1345 |
Protein accession | YP_001361001 |
Protein GI | 152965217 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00137426 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0761578 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCACGG TCCCGCCGCC GGCCCGGCGC CCCCTCCCCC GCGCGCTGTC GACCGAGGCG AACCGCTTCT GGCTGGCCTT CGGCGCGGCC ACCGTCCCGG CGCTGCTGTG CCAGCTCCTC CTCCTCGACC TCGGACCCGC GTGGTCGAAC TTCACCGTGC TGGTCGTCTG GTACGGCGCG CACCTCGTCC TGCACTCCCT GGCCGTGGCG GTCGCCTTCC ACCTCGACTT CGCCACGGCC CGGCGCGAGC CCCCGTCCGC CGACCGGTCC TGGCGGCGCC GCCTGCTGCA CGTCGACCCG AACGTCGACC TCGCCGTCTG GTTCTCGGCG TTCGCCCTGG CCGCGGCGGT GGCGCTGGCG GCCACCGGCG TCAGCGCGCG CTCGGCCGTC CTGGCCGCGG GCACCGTCGT GCTCGTGGTC GGGGCCTGGG TCGACGTCCT CGTGAGCTAC GCCGCGGACT ACGCCCGGCG CGACCACCGG GCCGGCGGCC TGGACTTCCC CGGCGAGCGG CCCGGGGCGT TCTCGGACTA CGTGTACTTC TCCGCGGCCG TGACCACGAC CTTCGGACCG ACCGACGTCA CCGTGACGAC GCGCGAGCTG CGCCGGCTCG TGCTGCTGCA CGGCCTGGTC GCCTTCGTCT TCAACACCGT CGTCCTGGCG CTGCTGATCT CCACGCTGCT GGGCTGA
|
Protein sequence | MATVPPPARR PLPRALSTEA NRFWLAFGAA TVPALLCQLL LLDLGPAWSN FTVLVVWYGA HLVLHSLAVA VAFHLDFATA RREPPSADRS WRRRLLHVDP NVDLAVWFSA FALAAAVALA ATGVSARSAV LAAGTVVLVV GAWVDVLVSY AADYARRDHR AGGLDFPGER PGAFSDYVYF SAAVTTTFGP TDVTVTTREL RRLVLLHGLV AFVFNTVVLA LLISTLLG
|
| |