| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_1221 |
|---|
| Symbol | |
|---|
| ID | 5337467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 1025381 |
|---|
| End bp | 1026154 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001360973 |
|---|
| Protein GI | 152965189 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.759613 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00160839 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGCTCCCCA GCGTGCCCCC CACCGCGTCC CGCACCGTGC TCCTCACCGG CGCCGCCGGC
CGCGTCGCCG GCCAGCTGCT GCCCGGCCTG CAGGACTACG ACCTGCGGCT GCTCGACCGC
TCCGTCCCCT CCGCGCCCCC CGGGGCGGAG GTGGTCGAGG GGGAGCTCAC CGACCGGGAC
CTGCTGGCCC GGGCCGTCAC CGGCGTGGAC ACCGTCGTCC ACCTCGCCGG CGACCCCCGC
CCCGACGCGA CGTGGGACGA CCTGCGCGGG CCCAACGTGG ACGGTTTCGC CGCCCTGCTG
GGCGCGGCCC GCGAGCACGG CGTGCGCCGG GTGGTCTACG CCAGCTCGGT GCACGCGATG
GGCCGCTACG AGGCCCTGGG CCGGGTGCCG ATCGACCCGG CCTGGGCCCC GGCGCCCTGC
TGCCCCTACG GGGCGACGAA GGCGTTCGAC GAGGCCGTGG CGGGCGTGTT CAGCCACCGG
TGGGGTCTGA GCACCATCGG GCTGCGGCTG GGCGCCACCG TCCCCGAGCC CGCCCAGCGC
AGCCAGCTCC GCGGCTGGCT GGGCCCGGCG GACCTGCGGC AGCTGGTCGT GCGGGCCGTC
GAGACCACCA CGCCCGCCGG CGTCTACCCC GGCGTCTCGG GCGCGCCGGG CTCGCACTGG
GACCTCACCA GCGCGGCGAG CGACCTGGAC TACCACCCCC GGCTGGACTC CGGCCGCTAC
GCCGAGACCG TCGAGGACGA CGGCACCGAC GTCACCACCT GCCCCCACCC CTGA
|
|---|
| Protein sequence | MLPSVPPTAS RTVLLTGAAG RVAGQLLPGL QDYDLRLLDR SVPSAPPGAE VVEGELTDRD
LLARAVTGVD TVVHLAGDPR PDATWDDLRG PNVDGFAALL GAAREHGVRR VVYASSVHAM
GRYEALGRVP IDPAWAPAPC CPYGATKAFD EAVAGVFSHR WGLSTIGLRL GATVPEPAQR
SQLRGWLGPA DLRQLVVRAV ETTTPAGVYP GVSGAPGSHW DLTSAASDLD YHPRLDSGRY
AETVEDDGTD VTTCPHP
|
|---|
| |