| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_1209 |
|---|
| Symbol | |
|---|
| ID | 5337446 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 1036919 |
|---|
| End bp | 1038268 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
|---|
| Protein accession | YP_001360961 |
|---|
| Protein GI | 152965177 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0794126 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGAGG ACGACCCCGC CCGCACCCCG GGCAGCGCAG GACCCACCGA CCGGTTGTGG
GCGGCCCCCA CCGCCGCCGG CCCCCTGGAC GCCGTGGTCG CCGTGCCCGG GTCGAAGTCG
CTCACCAACC GCTACCTGGT GGTGGCGGCC CTGGCCGAGC GGCCCTCGCT GCTGCGCGGC
CCGCTCGCCT CGCGCGACAC GCTGCTCATG GTCGACGCCC TGCGCCTGCT CGGGGCCGAC
GTCGCCGAGG GCGGCCGCGA CGCGCCGGGC GTGGACCCGG CGGACTGGGT GGTGCGACCG
GGACCGGTCA CCGGCGGCGC CCGGATCGAC TGCGGCCTGG CCGGCACCGT GATGCGCTTC
CTGCCCCCGG TGGCGGCCCT GGCCGAGGAG CCCGTCCACT TCGACGGCGA CGACCGCGCC
CGCGAGCGCC CGATGGGGGC GGTGCTCGAC GGCCTGCGCC AGCTCGGCGC CCTCGTCGAC
GACGGCGGCC GGGGGCTGCT GCCCTTCAGC GTCCAGGGCC CCGCGGGTGG CCTGCGCGGC
GGGCCGGTCC GCATCGACGC CTCCGCCTCC AGCCAGTTCG TCTCCGCGCT GCTGCTGGTG
GGGGCCCGGA CCCGCGAGGG CCTGGAGCTG GTCCACGAGG GCCCGCCGGT GCCGAGCGAG
CCGCACGTGC GGATGACGGT GGAAGTGCTG CGCGACGTCG GGGTCGTCGT GGACGACTCC
ACCCCCGGCC GGTGGTTCGT CGAGGCCGGG GAGATCAACC CCCTCGACGT GCAGGTCGAG
CCGGACCTGT CCAACGCCGG TCCCTTCCTC GCCGCGGCCG CGGTCGCGGG CGGGCGGGTG
CGCGTCCCGG GCTGGCCGCA GTCCACGACC CAGGCCGGGG ACCTGCTGCG CGACGTGCTG
GACCAGATGG GCGCGGAGGT GAACCTGGAC CGCGAGGGCC TCGTGGTCGA GGGCACCGGC
GAGCTGTACG GCATCGACCT GGACCTGCAC GAGGCCGGTG AGCTGGCCCC GGTCATCACC
GCCCTCGCCG CGCTGGCCTC CTCCCCGACC CGGCTGCGCG GCATCGCCCA CCTGCGCGGG
CACGAGACCG ACCGGCTGAA GGCGCTGGTC ACCGAGGTCA ACGCCCTGGG CGGTCAGGCC
GAGGAGACGA TCGACGGGCT GCTGGTGCGC CCGCGGCCGC TGCACGGCGG GGTGTTCCGC
ACCTACGCCG ACCACCGGAT GGCCACCGCC GGGGCGCTGC TGGGCCTCAC CGTGCCCGGC
GTCCTCGTGG AGGACGTCGC CACCACCCGC AAGACGCTGC CGGACTTCCC CGGGATGTGG
GCGTCCATGC TCGCCGGGAC CCCGGCCTGA
|
|---|
| Protein sequence | MTEDDPARTP GSAGPTDRLW AAPTAAGPLD AVVAVPGSKS LTNRYLVVAA LAERPSLLRG
PLASRDTLLM VDALRLLGAD VAEGGRDAPG VDPADWVVRP GPVTGGARID CGLAGTVMRF
LPPVAALAEE PVHFDGDDRA RERPMGAVLD GLRQLGALVD DGGRGLLPFS VQGPAGGLRG
GPVRIDASAS SQFVSALLLV GARTREGLEL VHEGPPVPSE PHVRMTVEVL RDVGVVVDDS
TPGRWFVEAG EINPLDVQVE PDLSNAGPFL AAAAVAGGRV RVPGWPQSTT QAGDLLRDVL
DQMGAEVNLD REGLVVEGTG ELYGIDLDLH EAGELAPVIT ALAALASSPT RLRGIAHLRG
HETDRLKALV TEVNALGGQA EETIDGLLVR PRPLHGGVFR TYADHRMATA GALLGLTVPG
VLVEDVATTR KTLPDFPGMW ASMLAGTPA
|
|---|
| |