Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_1133 |
Symbol | |
ID | 5337094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 1121080 |
End bp | 1122972 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | GTP-binding protein TypA |
Protein accession | YP_001360885 |
Protein GI | 152965101 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0323603 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCTTGA GCACCCGCGA GGACCTGCGC AACGTCGCGA TCGTCGCCCA CGTCGACCAC GGGAAGACGA CGCTCGTCGA CGCGATGCTC TGGCAGTCCG GCGCCTTCCG CGCCAACGCC GACGTCAACG AGCGAGTCAT GGACTCCGGG GACCTCGAGC GCGAGAAGGG CATCACGATC CTCGCGAAGA ACACCTCGGT GCACTACACC GGCCCGGGCT CGCCCGAGGG CGGCATGACC ATCAACATCA TCGACACCCC CGGCCACGCC GACTTCGGCG GTGAGGTCGA GCGCGGCCTG TCGATGGTCG ACGGCGTCGT GCTCCTCGTC GACGCCTCCG AGGGCCCGCT GCCGCAGACC CGCTTCGTGC TGCGCAAGGC GCTCGCGGCC GGTATGCCCG TCGTCATCCT CGTCAACAAG GTCGACCGCC CCGACGCGCG CATCGCCGCC GTCGTGGAGG AGACCTACGA CCTGCTGCTG GACCTCGCCG CTGACGTCGA GGGCATCGAC GCCGACAAGC TCCTCGAGGT CCCCGTCGTC TACGCCTCGG CCAAGAACGG CCGCGCCTCG CTGAACCAGC CCGAGGACGG CGGCCTGCCC GACCACGAGG ACCTCGTCCC GCTCTTCCAG ACGATCCTCG ACACCATCCC GGCGCCGGTC TACGACCCCG AGACCCCGCT GCAGGCGCAC GTCACCAACC TCGACGCCTC CCCGTTCCTG GGTCGCCTGG CCCTGCTGCG CATCTTCTCC GGCGAGCTGA TCAAGGGTCA GCAGGTCGCG TGGTGCAAGC ACGACGGCAC GATCGAGCGC GTCAAGATCA CCGAGCTGCT CGTCACCGAG GCCGTCACCC GCGTCCCGGG CGAGAAGGCC GGCCCCGGGG ACATCGTCGC CGTCGCCGGC ATCGAGGGGA TCACCATCGG CGAGACCCTC GCCGACCCCG ACGACCCGCG CCCGCTGCCG CTGATCACCG TCGACGAGCC CGCCATCTCG ATGGTCATCG GCACCAACAC CTCCCCGCTG GCCGGGCGGG TCAAGGGCTC CAAGGTCACC GCGCGCCTGG TCAAGGACCG CCTGGAGTCC GAGCTCGTCG GCAACGTCTC CATCCGCGTC CTGCCCACCG AGCGCCCCGA CGCGTGGGAG GTGCAGGGCC GCGGCGAGCT GGCGCTGGCC ATCCTCGTCG AGCAGATGCG CCGCGAGGGC TACGAGCTGA CCGTCGGCAA GCCGCAGGTC GTGCTGCGCA AGGACGAGAA CGGCAAGACC CTCGAGCCCT TCGAGAACCT CACCATCGAC GCGCCCGAGG AGTACCTGGG GGCCATCACC CAGCTGCTGG CCGCCCGCAA GGGCCGCATG GAGACGATGA CCAACCACGG CACCGGCTGG GTGCGCATGG AGTTCTACGT CCCCTCCCGC GGGCTCATCG GCTTCCGCAC CCAGTTCCTC ACCGACACCC GCGGCACCGG CATCGCGCAC GCGCTCTTCG CCCAGTACGA CCACTGGGCC GGCGAGATCC GCACCCGCCA GTCCGGCTCG CTGGTCGCCG ACCGCGCCGG GGCGGCCACC GCGTTCGCGA TGACGAACCT GCAGGAGCGC GGGCAGATGT TCATCGAGCC GACCTCCGAG GTGTACGAGG GCATGATCGT CGGGGAGAAC TCCCGCGCCG ACGACATGGA CGTCAACATC ACCAAGGAGA AGAAGCTCAC GAACATGCGC TCGTCGACCT CCGACGAGTT CGAGCGCCTC ATCCCCCCGC GCCACCTGTC CCTGGAGCAG TGCCTGGAGT TCTGCCGCGA GGACGAGTGC GTCGAGGTGA CCCCGGAGTC CGTGCGCATC CGCAAGGTCG TCCTGGAGGC CAACGCCCGC GCCAAGACGG CCTCGAAGGC CAAGAAGGGC TGA
|
Protein sequence | MPLSTREDLR NVAIVAHVDH GKTTLVDAML WQSGAFRANA DVNERVMDSG DLEREKGITI LAKNTSVHYT GPGSPEGGMT INIIDTPGHA DFGGEVERGL SMVDGVVLLV DASEGPLPQT RFVLRKALAA GMPVVILVNK VDRPDARIAA VVEETYDLLL DLAADVEGID ADKLLEVPVV YASAKNGRAS LNQPEDGGLP DHEDLVPLFQ TILDTIPAPV YDPETPLQAH VTNLDASPFL GRLALLRIFS GELIKGQQVA WCKHDGTIER VKITELLVTE AVTRVPGEKA GPGDIVAVAG IEGITIGETL ADPDDPRPLP LITVDEPAIS MVIGTNTSPL AGRVKGSKVT ARLVKDRLES ELVGNVSIRV LPTERPDAWE VQGRGELALA ILVEQMRREG YELTVGKPQV VLRKDENGKT LEPFENLTID APEEYLGAIT QLLAARKGRM ETMTNHGTGW VRMEFYVPSR GLIGFRTQFL TDTRGTGIAH ALFAQYDHWA GEIRTRQSGS LVADRAGAAT AFAMTNLQER GQMFIEPTSE VYEGMIVGEN SRADDMDVNI TKEKKLTNMR SSTSDEFERL IPPRHLSLEQ CLEFCREDEC VEVTPESVRI RKVVLEANAR AKTASKAKKG
|
| |