| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_1132 |
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| Symbol | |
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| ID | 5337093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kineococcus radiotolerans SRS30216 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009664 |
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| Strand | + |
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| Start bp | 1123213 |
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| End bp | 1124937 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_001360884 |
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| Protein GI | 152965100 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0319453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCAC CGCCCGAGCA CCGATCCGAC GCCTCGTCGA CACCACCGGG GTCGAGCGCT
GCGGGGGCGG TGAGCAGCCG CGACCTCGCC CGCACCGCCC ACCCGCCGGT GGACCGCAGG
ACCTTCGCGG TCGCCGCCGG CGTGGTCGTC CTCTTCCTCC TCGTGGGCGC GGTCTGGCCC
GAGCAGCTGC AGTCCGGCGC GGACGCCGTC CTCGAGGTCG TGGTCGGTGA CTTCGGCTGG
GCCTTCGTGC TCGGCGCGAC CGGCTTCGTG GTCCTCGCCC TCGTCCTGGC CTTCAGCCGC
TTCGGCCGCA TCCGCCTCGG CCGCGACGAG GACCGCCCCG AGCACTCGCG CGCGTCCTGG
ATCGCGATGA TGTTCTCCGC GGGCATGGGC ATCGGCCTGA TGTTCTACGG CGTCACCGAA
CCGGTGACCC ACCTCATGAC CGTCCCGCAG AACGACGCCG CCCCCGGGTC GCAGGCCGCG
GCGCGCGAGG CGGTCAACTA CTCGCTCTTC CACTGGGGCC TGCACCCGTG GGCGATCTAC
GCCGTGGTCG GCCTCGCCCT GGCGTACTCC AGCTACCGCA AGGAGCGCGT GGGCGGCTTC
TCCGCCGCGT TCGCCCCGCT GCTGCGGGGC CGGCGCGGCC GGGGCGCGGC GCGGGTCATC
GACGTCTTCG CGATCTTCGC GACGCTCTTC GGCTCCGCCG TCAGCCTCGG CCTCGGCGCG
GCGCAGATGA ACGGCGGGCT CACCGAGGTC TTCGGCGTGC CGAACAGCAC CACCGTCAAG
GCGACCATCA TCGCCGTCCT GACCGTCTGC TTCGTCGTCT CGGCCGTCAG CGGCATCGAG
CGCGGCATCA AGTGGCTCTC CAACACCAAC ATGGTGCTCG CCCTGCTGCT GCTGCTCTTC
CTCTTCGTCG TGGGCCCCAC GGTCTTCGTG CTCAACCTGG TCCCGGCCTC GCTGGGGAAC
TACCTCACGG CGCTGCCGAC GATGTCCTTC CGCACCGGGG CCTTCGGCGG CACCGACTGG
CTCAGCGGCT GGACGTTGTT CTACTGGGCG TGGTGGGTCT CGTGGACGCC GTTCGTCGGC
GCCTTCCTGG CCAAGATCTC CAAGGGCCGC ACCGTCCGCG AGTTCGTCGT GGGCGTCATG
CTCGTCCCGA CCGCGGTCAG CCTCCTCTGG TTCTCCGTCC TCGGCGGCGC GGCCATCGAC
CTGCAGCGCC GGTTCGTGGC GGGCACCGGT GGCGCGGACA TCGCGGGCAT CGCGGACCAG
GAGTCGCAGA TGTTCACCTT CCTGCAGCAG TTCCCCTGGG CCGGGGCCAC CTCGGTGCTC
GTCGTCGTCC TGGTCGCGAT CTTCTTCGTC TCCGGCGCCG ACGCCTCCAG CATCGTCATG
GGGAGCCTCA GCTCGTACGG GGTGGACGAG CCGCGCAGGT GGGTCGTCGC CGTCTGGGGC
GGGCTGATGG GGCTCGTCGC CATCGTCCTG TTCTTCGCCG GCGGCCTGGA GGCGTTGCAG
GACATCACCA TCATCGCCGC GGCGCCGTTC CTGGTCATCA TGGCGCTCAT GTGCGTGGCG
CTGGTCAAGG ACCTGCTGCG CGACCCGCGG ATCACCACCC GGGAGCGCCG TCACGGCGAC
CGCCGCGACC CGCGGGTCAC GGCCGTCGAC CACGAGTGGG AGAGCCCGCT GCCCGTCGAG
GGGCCGCCGA CGCCGCCGGC TCCCGGCGCA CGCCCCTCGC GCTGA
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| Protein sequence | MSSPPEHRSD ASSTPPGSSA AGAVSSRDLA RTAHPPVDRR TFAVAAGVVV LFLLVGAVWP
EQLQSGADAV LEVVVGDFGW AFVLGATGFV VLALVLAFSR FGRIRLGRDE DRPEHSRASW
IAMMFSAGMG IGLMFYGVTE PVTHLMTVPQ NDAAPGSQAA AREAVNYSLF HWGLHPWAIY
AVVGLALAYS SYRKERVGGF SAAFAPLLRG RRGRGAARVI DVFAIFATLF GSAVSLGLGA
AQMNGGLTEV FGVPNSTTVK ATIIAVLTVC FVVSAVSGIE RGIKWLSNTN MVLALLLLLF
LFVVGPTVFV LNLVPASLGN YLTALPTMSF RTGAFGGTDW LSGWTLFYWA WWVSWTPFVG
AFLAKISKGR TVREFVVGVM LVPTAVSLLW FSVLGGAAID LQRRFVAGTG GADIAGIADQ
ESQMFTFLQQ FPWAGATSVL VVVLVAIFFV SGADASSIVM GSLSSYGVDE PRRWVVAVWG
GLMGLVAIVL FFAGGLEALQ DITIIAAAPF LVIMALMCVA LVKDLLRDPR ITTRERRHGD
RRDPRVTAVD HEWESPLPVE GPPTPPAPGA RPSR
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