Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_1123 |
Symbol | ispH |
ID | 5337011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 1134238 |
End bp | 1135323 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_001360875 |
Protein GI | 152965091 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.582503 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCCTG CCCCGCTCGA CACCGCGGAC CCCGTGGCCC CCGCCGACGA CTGCAACGAC ACCTCGACGC TGGCCGCGAG CGGCCGGCGC CCGGCGTGGG ACGGCCGCAA GCGCGTCCTG CTCGCCGCCC CCCGCGGCTA CTGCGCCGGG GTGGACCGGG CCGTGATCGC CGTCGAGAAG GCGCTGGAGC TGTACGGGGC GCCGGTCTAC GTCCGCAAGG AGATCGTGCA CAACAAGCAC GTCGTGCGGA CGCTGTCCGA GCGCGGGGCC GTCTTCGTCG ACGAGACCGA CGCCGTCCCC GAGGGCGAGC ACCTGGTGTT CTCCGCGCAC GGGGTCAGCC CCGCGGTGCG CGAGGCCGCG GCGGCGCGCT CGCTGCAGAC CATCGACGCG ACCTGCCCGC TGGTGACGAA GGTGCACAAG GAGGCCGTCC GCTTCGCCAA GCAGGACGCC GAGATCCTGC TCATCGGCCA CACCGGCCAC GAGGAGGTCG AGGGCACCGC GGGCGAGGCG CCGGACCACA TCACCGTCGT GGACAGCCCC GAGGTCGCCG ACACGATCCA GGTCAAGGAC CCCGACAACC TCGTCTGGCT CTCGCAGACG ACGCTGTCGG TGGACGAGAC GATGGAGACC GTCCGCCGCC TGCGGCAGCG CTTCCCGAAC CTGCAGGACC CGCCGAGCGA CGACATCTGC TACGCCACCT CCAACCGGCA GGTGGCGGTG AAGAAGATCG CCCCCGAGGC CGACCTGGTC ATCGTCGTCG GCTCGGCGAA CTCCTCGAAC TCCGTGCGCC TGGTCGAGGT CGCCCTCGAC GCCGGGGCCC GCGCCTCCCA CCGCGTCGAC GGGGCCCACG AGGTCGACGA CGCCTGGTTC GAGGGCGTCA CGACCGTGGG GGTGACCTCC GGCGCCTCGG TGCCCGAGAT CCTCGTGCGC GAGGTGCTGG AGCTGCTCGC CGCCCGCGGC TACGGGCAGG TCGAGGAGGT CACGACCGCG CAGGAGGACC TCGTCTTCTC GCTGCCCACC GACCTGCGCC GCGACCTCAA GGCCGGCCCG GGGCCGCGGC GCTCGCTGCC CGTCACCCCG GTCTGA
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Protein sequence | MTPAPLDTAD PVAPADDCND TSTLAASGRR PAWDGRKRVL LAAPRGYCAG VDRAVIAVEK ALELYGAPVY VRKEIVHNKH VVRTLSERGA VFVDETDAVP EGEHLVFSAH GVSPAVREAA AARSLQTIDA TCPLVTKVHK EAVRFAKQDA EILLIGHTGH EEVEGTAGEA PDHITVVDSP EVADTIQVKD PDNLVWLSQT TLSVDETMET VRRLRQRFPN LQDPPSDDIC YATSNRQVAV KKIAPEADLV IVVGSANSSN SVRLVEVALD AGARASHRVD GAHEVDDAWF EGVTTVGVTS GASVPEILVR EVLELLAARG YGQVEEVTTA QEDLVFSLPT DLRRDLKAGP GPRRSLPVTP V
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