Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_1007 |
Symbol | |
ID | 5334418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 1269815 |
End bp | 1270660 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | MIP family channel protein |
Protein accession | YP_001360759 |
Protein GI | 152964975 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0697124 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00139101 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGTCCCACA GCAACTCGAC GGCGAGCGCG CCACCACAGC GCGCGGTCCA GCGAAACCCC ACCCTCACCG GTGAGCTCCT CGCCGAGTTC GCCGGTACGG CGATCCTCAT CCTCTTCGGC GTCGGCGTGG TCGCCCAGGT CGTGGCGGGC CAGAACGGCG GCGACGACTC GATCCACTGG GCCTGGGGCC TCGGGGTCAC CTTCGGCATC TACGTCGCCG GCCGCACCAC CGGCGCCCAC CTCAACCCCG CGGTGACCAT CGCCCTCGCG GTCTTCCAGG GCTTCTCCTG GAAGAAGGTC CTCCCCTACA GCGTCGCGCA GTTCCTCGGC GCCCTCGTCG CCGCGCTCGT CGTCCGCTGG GTCTACGCGG ACGCCATCGC GACGGTCGAC CCGGACACCA CCTCCGCCAC CCAGGGCATC TTCTCCACCC TGCCCGGCGA GGGCGTCAGC ATCGGCACCG CCTTCCTCGA CCAGGTCGTC GGCACCGCCA TCCTCGTCTT CCTGATCTTC GCGATCTCCC AGACGCGGGC CATGCCGCCC GGGGCGAACC TCGCCCCCTT CATCGTCGGC CTCGTCGTCG TCGGCATCGG CATGGCGTGG GGCAGCAACG CCGGCTACGC CATCAACCCC GCGCGCGACT TCGGTCCCCG GGTGGCGTCC TGGCTCACCG GCTACTCCAC GGCGATGCGC GAACCCGTCG GGAACCAGTT CTACTTCTGG GTGCCCATCG TCGCCCCCGT CCTCGGCGGC CTCATCGGCG GCGCGCTCTA CAAGGTGCTC GTCGAGCGCC ACCTGCCCGA CGAGGACGCC GCGGAGCCCG AGGGCCGCGT CCGCACCGAC CACTGA
|
Protein sequence | MSHSNSTASA PPQRAVQRNP TLTGELLAEF AGTAILILFG VGVVAQVVAG QNGGDDSIHW AWGLGVTFGI YVAGRTTGAH LNPAVTIALA VFQGFSWKKV LPYSVAQFLG ALVAALVVRW VYADAIATVD PDTTSATQGI FSTLPGEGVS IGTAFLDQVV GTAILVFLIF AISQTRAMPP GANLAPFIVG LVVVGIGMAW GSNAGYAINP ARDFGPRVAS WLTGYSTAMR EPVGNQFYFW VPIVAPVLGG LIGGALYKVL VERHLPDEDA AEPEGRVRTD H
|
| |