Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_1001 |
Symbol | |
ID | 5334415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 1278243 |
End bp | 1279907 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | FAD linked oxidase domain protein |
Protein accession | YP_001360753 |
Protein GI | 152964969 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0163066 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTCGAGC ACATGAAGTG GTGGGGCTGG GGCCAGGAGG GCGTCGCGTT CCACCACGAG GACAAGCCGA ACCTGGCGCC GTTCGTGAAG CGCGTGTCCG GCATCGACTT CGACGCCCCG CCCGCGCAGG TGCCGGAGCT GTCCGAGCTG GAGGTCCCCG CCTCCCGGGC CTCGCAGGAG CTGCGCGAGG CCCTCGTCGC GGCGCTGGGC GCCGAGCACG TCCACGACGA CGACCACGAC CGCGTGGTGC ACACCTACGG CAAGTCGATG CGCGACCTCG TGCGCGTCCG CCGCGGCGAC TTCGGCCGCG TGCCGGACCT GATCCTCTAC CCCGGCACCG AGGCCGAGGT GGAGGCCGTG CTGCGGATCG CCCTGGACGC CGACGCGGTG CTCATCCCCT TCGGCGGCGG CTCCAACATC GTCGGCTCCC TGGAGGCCCC GCGCGAGGAG ACCCGCCCGG TGCTGTCGCT GGACGTGGGC CGGATGCGCG CGGTCCTCTC CCTCGACGAG ACGGCGCAGA CCGCCCGCAT CCAGGCCGGG GCCCTCGGCC CGGACCTCGA GGCGCAGCTC AACGCGCGCG GCTGGACGAT CGGGCACTTC CCCGACAGCT TCAAGCACTC CACCCTCGGC GGCTGGATCG CGACGCGGTC CTCGGGCATG CAGTCCGACC GCTTCGGTGA CATCGCCGAC ATCACCCGCG CCGTGCGGGT GGTGACCCCG AAGGGCCTCG TCGCGACCTC CGAGGTCCCC GTCCAGTCGG TGGGCCCCTC GGTGCGCGAG ATGGTCCTGG GCAGCGAGGG CCGGCTCGGG ATCATCACCG AGGCGACCGT CCAGGTGCAC CGCGTGGCCG AGGAGCGCGT CATCCAGGCG TACTTCTTCC CCGACTACGC CAGCGGGCTG AAGGCCATGC ACGACATCGC CGCCTCCGAC GCCTCCCCGA GCATCACCCG GGTCTCGGAC GCCAACGAGA CCCAGTTCAC CCTGGCGACG TCGAAGAAGG GCAGCCCCTT GGGGCAGCTG CTCAACAAGG GCGTGCAGCT CTACGCGAGC AAGCGCAAGG GCTTCGACCT CTCCGAGATG TGCCTGTCGT TCATCGGGTT CGAGGGCTCC TCGCTGGGGG TGCGCCGCAA CAAGGCGCTG GTCGCCGAGA TCGTCAAGAA GCACGGCGGG TTCGGGGTCG GGTCCGGCCC GGGCACCCTG TACGACCAGA AGAAGTTCGA CACCCCCTAC ATCCGCGACT TCATCCTCGA CCGCGGCGCC TACGGCGACG TGTCCGAGAC GTCCTCGTCG TGGACGACGC TGAAGTCGCT GCACGACAAC GTGGTGGCCG CGGCGGGCAA GGCCTTCGCC GAGGTCGGCG TCAAGGGTTT CGTCTTCTGC CACCTCTCGC ACAGCTACCA CTCCGGGGCG TGCCAGTACT TCACCTTCGC GTTCCAGCCC CCCACGGACC GCGACGGCCT CGAGGCCTAC GACGTGGTCA AGGGCGCCAT CCAGCAGGCG TTCATCGACA ACGGCGGCAC GCTGTCGCAC CACCACGCCG TGGGGCGCGA GCACAAGCGC TGGGTGAGCG AGGACCTCTC CCCGGCGGGG GCGGAGATCG TCAGCACGCT GTTCGCCGGG GTGGACCCCG GTCGCAACCT CAACCCCGGC GCCATCGTCG ACTGA
|
Protein sequence | MVEHMKWWGW GQEGVAFHHE DKPNLAPFVK RVSGIDFDAP PAQVPELSEL EVPASRASQE LREALVAALG AEHVHDDDHD RVVHTYGKSM RDLVRVRRGD FGRVPDLILY PGTEAEVEAV LRIALDADAV LIPFGGGSNI VGSLEAPREE TRPVLSLDVG RMRAVLSLDE TAQTARIQAG ALGPDLEAQL NARGWTIGHF PDSFKHSTLG GWIATRSSGM QSDRFGDIAD ITRAVRVVTP KGLVATSEVP VQSVGPSVRE MVLGSEGRLG IITEATVQVH RVAEERVIQA YFFPDYASGL KAMHDIAASD ASPSITRVSD ANETQFTLAT SKKGSPLGQL LNKGVQLYAS KRKGFDLSEM CLSFIGFEGS SLGVRRNKAL VAEIVKKHGG FGVGSGPGTL YDQKKFDTPY IRDFILDRGA YGDVSETSSS WTTLKSLHDN VVAAAGKAFA EVGVKGFVFC HLSHSYHSGA CQYFTFAFQP PTDRDGLEAY DVVKGAIQQA FIDNGGTLSH HHAVGREHKR WVSEDLSPAG AEIVSTLFAG VDPGRNLNPG AIVD
|
| |