| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_0992 |
|---|
| Symbol | |
|---|
| ID | 5335767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | - |
|---|
| Start bp | 1289689 |
|---|
| End bp | 1293165 |
|---|
| Gene Length | 3477 bp |
|---|
| Protein Length | 1158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | |
|---|
| Product | exodeoxyribonuclease V, gamma subunit |
|---|
| Protein accession | YP_001360744 |
|---|
| Protein GI | 152964960 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.218847 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.146183 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCCACG TCCACCGCTC CGAGAGCGCG AACACCCTGG TGACCGCCCT CGCCGGCCTC
CTGCGCGACC CCGCGCCGGG CGCCGACCCG TTCGCCCCCG ACGTCCTCGC CGTGGGGGCC
CGCGGCACCG AGCGGTGGAT CGCGCAGCGG CTGTCGCACC ACCTCGGCGC CGGCGACCCC
GCCGCGGGCG GCGGGGACGA CGGGATCTGC GCGCGGGTGG ACACCTCCTC CCCGGCGCAC
CTGCTCGACG GGGTCCTCGC CGCGGCGCTC GAGCGCACCC GCCCCGGGAC CGGCGACGCC
GTCGAGCGGT GGGCGCCGTC GTCGCTGACG TGGGACGTCC TGGAGGTCCT CGACGAGATC
GCCCCCGCCG ACGGCGGCCC CGCCCCCGAC GGGCGCCCGG AGTTCGCCCT CCTGCGCCAC
CACCTGCGCC ACCACCCCGG CGACGACGGC CCGGGCGGCC CGGGGGGCCC GGGCACCCCG
CCCGTGCGCC GGACGGCCGC CGCGGCCCGG GTGGCGGGGC TGTTCGCCCG CTACGGCGCG
GCCCGCCCGC AGCTGCTCGC GGACTGGGCC GCCGGGCGCG ACGACGCCCC CGGCGCCCCG
CTGCCCGCGG ACCTGCGCTG GCAGCCGGAG GTGTTCCGCG CCGTGCGCGA GCGCGTCGGC
CTGCCCGCGC CCGCCGAACT GCTCGACGAC GCCTGCGCCG CCCTGCGCAC CGACCCGGCC
CTGAGCGACC TCGGGCCCCG CCTCGCGGTG TTCCTCGTGA CCCGCCTGGC CACCAGCCGG
CTGCGGGTGC TGTCCGCGCT CGCCGAGCAC CGCGAGGTCC ACCTCCTCCT CCAGCACCCC
AGCCCCGCGC TGTGGGACGC CACCGCCGCG GCGCTGCGCA CGGACCCGGG ACCGCGGCGC
GCGGCCTGGG CGGCCCACGC CCCCGGCCGC CACCCGCTGC TGCGGTCCAT GGCCCGCGAC
GTGCGGGAGC TGCAGGTGCG CCTGGCCCAC GCCGCCCCCG GGCACACCGA CGTCCACCAC
CCCGCCCCGG AACCGGCGCC CACCCTGCTC GGGACCCTCC AGGCGGCCCT GGCCCGCGAC
GCCGAGCCCG CCCCCGGGCC GGACCCGGGG GACCGCTCGG TGCAGGTGCA CGCCTGCCAC
GGCCGCGCCC GGCAGGTCGA GGTGCTGCGC GAGGTCGTCC TCGGCCTCCT CGACGCCGAC
CCGACGCTGC AGCCGCGCGA CGTCCTCGTC GCGTGCCCCG ACGTCGAGAC CTTCGCCCCG
CTGGTCTCGG CCGCCTTCGC CACCGACTCC CACCCCGGCG GGGGGCTGCG GGTGCAGGTC
GCCGACCGCT CCGCGCTGCG GACCAACCCG CTGCTCGGTC TCGCCGTCCG GCTGCTGGGG
CTGGCGCAGT CGCGGGCCGG CGCCACCGAG GTCCTGGACC TCGCCGCCGC CGCCCCGGTG
CGCCGCCGCT TCGACCTCGA CGACGAGGAC CTCGAGCAGC TGCGCGAGTG GACCGTCGCC
GCCGGGGTGC ACTGGGGCCT CAGCGCCCGC CACCGCGGCG CCTGGCAGCT CGGCTCCCTG
GACCAGGGGA CGTGGCGGGC CGGGCTGGAC CGCCTCCTCG TCGGGGTCGC CGTCGGCGGC
GCCGTCGAGG ACGACCTCGT CGGGCGCACC GGGGAGGACG GGCTGCTCGG CGCGGTCGTC
CCGCTGGCCG ACGTGGAGTC CAGCCGCATC GACCTCGCCG GCCGGTTCGC CGAGCTCCTC
GACCGCCTCG ACGCCGCCGT CACCCGCCTG CAGGGCCGGC ACGGCGTCGC CGCCTGGTGC
GACACGCTCC TCGACGCCGT CCTCGACCTC GCCGACACCG CCCCCGAGGA CGCCTGGCAG
GTCGCGCAGC TGCGCCGGGA GCTCGGCGTC GTCGCCCACG ACGCCGCCCG CGCCGGGACC
GCGCGGGTCG GCCTGACCGA CGTCGCCGCC ACGATCTCCG AACGCTTCGC CGCGCACCCG
CAGCGGGCGA ACTTCCGCAC CGGGGCCCTC ACCGTCTGCA CCCCCGCCCC GGTGCGCGCC
GTCCCGCACC GCGTCGTCTG CCTGCTCGGC ATGGACGACG GCGCCTTCCC CCGGGCGGGC
GGCCCCGACG CCGACGACGT CCTCGCCCGC GACCCCCACG TCGGCGACCG CGACCCGCGC
GGCGAGGACC GCCAGGTCCT GCTCGACCTC GTCCGCTCCG CCCGGGACGC CCTCGTCGTC
ACCTACTCCG GGCGCGACGT CCGCACCGGG GCGGTGCTGC CGCCCGCGGT GCCGGTGGGG
GAGGTCCTCG ACGCCCTGGA GGCCGCCCAC CCCGGGGTGC GCGCGCGCAT CGAGGTCCAC
CACCCCCTGC AGCCCACCGA CCGGCGCAAC TTCACCCCCG GGGCCCTGGG CACCGACGGG
CCCTTCAGCC ACGACGGCAC GGCGTTCTCC GGAGCCGACG CCGGGCACCG CGAACCCGCC
CCCGTCCCGC CGTTCCTGCC CGCGGCCCTG CCGCCGGCCC CCGCCGCGGA CCTCGACCTC
GACACCCTCG TGCAGTTCCT CCAGCACCCC GCCCGGGGGT TCCTGCGCCA GCGCCTCGAC
GTCGCCTCCG CCACCCGCGA GGAGGAACCC GACGACGCGC TCCCCGTGCA GCTGGACGCC
CTGCAGAAGT GGGCGGTGGG CGACCGCGCG CTCGCGGCCC GGCTGCGGGG GGTCGCGGCC
CCCGAGGTCG TGCGGCTGGA GGGCGCCCGC GGCGGCCTGC CGCCCGGGCC GCTGGGGGTG
GCGGTGCTGC GCGAGGTCGG CCCGGTCGTC GACGCCATCG CCGGGGTCGC CGCCGAGTTC
GACACCGCCC CCCCGCGCAG CGTCGACGTC GAGCTCGACC TCGACGTCCC CGGCGTCGGG
CAGCTGCGCC TGACCGGCAA CGTCCGCGGG GTCCGTCCGG TGCGCGGCGG GGGCCGGGCC
ACCGGCGAGG TCGCCGTCAC CACCGTCTAC TCCCGCATCA AGGGCAAGCA GACGCTGCGG
GCCTGGGTCG AGCTGCTCGC GCTGTCCGCC GCCCACCCGG GGACGGAGTT CCGGACCGTC
CTCGTCGGGC GCGGGGACCG CGGCAGCACC GGGTTGCTGA CCCTGGGCCC GGTGCGCTCC
GACGCGGCCC GGGACCTGCT GGTGGACCTG CTGGAGCTGC GCGCGGTCGG GCTGCGGTTC
CCGCTGCCGC TGCCGGTGGA CACCGCCGCG GCGTGGGCGC AGGAGGCCTG GCGCGGGCGC
GCCCCCGACG CCTGCCTGCG GGCGGCGCGG CGGGCCTGGA CCTCGGACTT CTCCTTCGAC
AAGGAGGACC GGCAGGAGGA GAACGTGACC GTGTGGGGTG CGGAGCGACC CGTCGAGCAC
CTGGTGCGGT GGGAACCGCC GACGACCCTG CCCCCGGGCG TCCCGACCAC GTTCGAGGGG
TTGGTGCGCC GGGTGTGGGA ACCCCTGCTG GGGGTCCAGC GGATGGACGA GCGGTGA
|
|---|
| Protein sequence | MLHVHRSESA NTLVTALAGL LRDPAPGADP FAPDVLAVGA RGTERWIAQR LSHHLGAGDP
AAGGGDDGIC ARVDTSSPAH LLDGVLAAAL ERTRPGTGDA VERWAPSSLT WDVLEVLDEI
APADGGPAPD GRPEFALLRH HLRHHPGDDG PGGPGGPGTP PVRRTAAAAR VAGLFARYGA
ARPQLLADWA AGRDDAPGAP LPADLRWQPE VFRAVRERVG LPAPAELLDD ACAALRTDPA
LSDLGPRLAV FLVTRLATSR LRVLSALAEH REVHLLLQHP SPALWDATAA ALRTDPGPRR
AAWAAHAPGR HPLLRSMARD VRELQVRLAH AAPGHTDVHH PAPEPAPTLL GTLQAALARD
AEPAPGPDPG DRSVQVHACH GRARQVEVLR EVVLGLLDAD PTLQPRDVLV ACPDVETFAP
LVSAAFATDS HPGGGLRVQV ADRSALRTNP LLGLAVRLLG LAQSRAGATE VLDLAAAAPV
RRRFDLDDED LEQLREWTVA AGVHWGLSAR HRGAWQLGSL DQGTWRAGLD RLLVGVAVGG
AVEDDLVGRT GEDGLLGAVV PLADVESSRI DLAGRFAELL DRLDAAVTRL QGRHGVAAWC
DTLLDAVLDL ADTAPEDAWQ VAQLRRELGV VAHDAARAGT ARVGLTDVAA TISERFAAHP
QRANFRTGAL TVCTPAPVRA VPHRVVCLLG MDDGAFPRAG GPDADDVLAR DPHVGDRDPR
GEDRQVLLDL VRSARDALVV TYSGRDVRTG AVLPPAVPVG EVLDALEAAH PGVRARIEVH
HPLQPTDRRN FTPGALGTDG PFSHDGTAFS GADAGHREPA PVPPFLPAAL PPAPAADLDL
DTLVQFLQHP ARGFLRQRLD VASATREEEP DDALPVQLDA LQKWAVGDRA LAARLRGVAA
PEVVRLEGAR GGLPPGPLGV AVLREVGPVV DAIAGVAAEF DTAPPRSVDV ELDLDVPGVG
QLRLTGNVRG VRPVRGGGRA TGEVAVTTVY SRIKGKQTLR AWVELLALSA AHPGTEFRTV
LVGRGDRGST GLLTLGPVRS DAARDLLVDL LELRAVGLRF PLPLPVDTAA AWAQEAWRGR
APDACLRAAR RAWTSDFSFD KEDRQEENVT VWGAERPVEH LVRWEPPTTL PPGVPTTFEG
LVRRVWEPLL GVQRMDER
|
|---|
| |