Gene Krad_0965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_0965 
Symbol 
ID5335205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp1317511 
End bp1318878 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content71% 
IMG OID 
Productextracellular solute-binding protein family 1 
Protein accessionYP_001360717 
Protein GI152964933 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0052659 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGAACAGTC ATCCCCCGAC ACCCCGCGCA CGGGGTGCCC TCAGCCGGCG CAACCTGCTG 
CGCGGCGGCC TGGCCGCCGG CGGGCTCGGC GCCGTCGCCG CCACCTCCGG GTGCGGTTCG
CCCCTGGCCG CGGGCCTGGC CGGCACCCAG CTGAACCCCG GGACGGTGAC GTTCTGGAAC
CTCTTCGGCG GTGGTGACGG TGCGCGGCTG CAGCTGATGC TCGACGAGTA CCGCCGGCAG
CAGGGCAGCA CCGAGTCCCT CCAGGCGGCC ACCTTCGCGT GGGGCAACCC GTACTACACG
AAGGTGTCCC TCGCCACGCT GGGCAACAAG CCGCCGGACG TGGCGGTCGC CCACCTCACC
CGCGCCTCCA ACCTCGCCGC GGCGGGCCTG CTGGCCCCGA TCACCGACGA CGTCCTGGCC
CTGGCCGGGC TCGCCAGCAG CGACTTCAAC GAGCGCGCGT GGGAGGCCTC GAAGTTCGAG
GGCCAGGCCT ACGCCATCCC CCTGGACACC CACCCGTGGG TGCTCTTCTT CAACGCCGAC
GTCTGCCAGG CCGCCGGGCT CCTGGGGCCC GACGGCGAGC TCGCGCCCAT CGAGGGGCTC
GAGGCGTGGG AGGCGGCGCT CACCGCGGGC AAGGAAGCCT CCGGCGGGTT CGGCGCCACG
ACGGCCACGG TGGCCGACGA CTCCAACAAC TGGCGGTTCT TCAACACCGT CTACAGCCAG
CGCGAGGGGA ACACCCCGCT CATCGACGAC GAGGGCCTCT CGGTCACGAT GAACGACGAG
CTCGCCGTCG ACACCCTGGC GACGATGCGC AGCTGGGTGG AGAAGGGCCT CATGCCCGCC
ACCGTGGACA CCCCGGGCGC GGAGACGCTC ATGTTCACGG GCAAGTCGGC GTTCTTCATG
AACGGCGAGT GGGAGGTCAC GACCGCCCAG AGCATCGAGG GCCTGAACTT CGGCATGACC
GCCTTCCCGA CCCTGTTCGA CCGGCCCGCC GCGCACGCCG ACTCCCACGC CTTCGTCCTG
CCCCGCATGG AGCGCGACGA CGCGCAGCTG GAGCGGGCGA TGGGCTTCGT GAAGTCGCTG
CTGGACCAGG GCATGACCTG GGCCGAGGGC GGGCACATCC CGACCTACCT GCCCACCTTC
GAGAGCAGCG AGTACCAGCA GCTCGAACCG ATGTCGAACT ACGCCGACGC GGCCTCCTAC
GCCTCCTACG ACCCGCCGGC CTGGTACTCC GGCTCGGGTT CGAACTTCGA GACCGTCACG
GGCGCGACCA TCGGCCTCGT CCAGCAGGGC CTCACCAAGC CCGCGGACGC CGTCGCCGGC
ATCCGCGCGG CGCTGGAGAA CTACGCCAAG ACGGCGAACC CGCTGTGA
 
Protein sequence
MNSHPPTPRA RGALSRRNLL RGGLAAGGLG AVAATSGCGS PLAAGLAGTQ LNPGTVTFWN 
LFGGGDGARL QLMLDEYRRQ QGSTESLQAA TFAWGNPYYT KVSLATLGNK PPDVAVAHLT
RASNLAAAGL LAPITDDVLA LAGLASSDFN ERAWEASKFE GQAYAIPLDT HPWVLFFNAD
VCQAAGLLGP DGELAPIEGL EAWEAALTAG KEASGGFGAT TATVADDSNN WRFFNTVYSQ
REGNTPLIDD EGLSVTMNDE LAVDTLATMR SWVEKGLMPA TVDTPGAETL MFTGKSAFFM
NGEWEVTTAQ SIEGLNFGMT AFPTLFDRPA AHADSHAFVL PRMERDDAQL ERAMGFVKSL
LDQGMTWAEG GHIPTYLPTF ESSEYQQLEP MSNYADAASY ASYDPPAWYS GSGSNFETVT
GATIGLVQQG LTKPADAVAG IRAALENYAK TANPL