Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_0965 |
Symbol | |
ID | 5335205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 1317511 |
End bp | 1318878 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_001360717 |
Protein GI | 152964933 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0052659 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGAACAGTC ATCCCCCGAC ACCCCGCGCA CGGGGTGCCC TCAGCCGGCG CAACCTGCTG CGCGGCGGCC TGGCCGCCGG CGGGCTCGGC GCCGTCGCCG CCACCTCCGG GTGCGGTTCG CCCCTGGCCG CGGGCCTGGC CGGCACCCAG CTGAACCCCG GGACGGTGAC GTTCTGGAAC CTCTTCGGCG GTGGTGACGG TGCGCGGCTG CAGCTGATGC TCGACGAGTA CCGCCGGCAG CAGGGCAGCA CCGAGTCCCT CCAGGCGGCC ACCTTCGCGT GGGGCAACCC GTACTACACG AAGGTGTCCC TCGCCACGCT GGGCAACAAG CCGCCGGACG TGGCGGTCGC CCACCTCACC CGCGCCTCCA ACCTCGCCGC GGCGGGCCTG CTGGCCCCGA TCACCGACGA CGTCCTGGCC CTGGCCGGGC TCGCCAGCAG CGACTTCAAC GAGCGCGCGT GGGAGGCCTC GAAGTTCGAG GGCCAGGCCT ACGCCATCCC CCTGGACACC CACCCGTGGG TGCTCTTCTT CAACGCCGAC GTCTGCCAGG CCGCCGGGCT CCTGGGGCCC GACGGCGAGC TCGCGCCCAT CGAGGGGCTC GAGGCGTGGG AGGCGGCGCT CACCGCGGGC AAGGAAGCCT CCGGCGGGTT CGGCGCCACG ACGGCCACGG TGGCCGACGA CTCCAACAAC TGGCGGTTCT TCAACACCGT CTACAGCCAG CGCGAGGGGA ACACCCCGCT CATCGACGAC GAGGGCCTCT CGGTCACGAT GAACGACGAG CTCGCCGTCG ACACCCTGGC GACGATGCGC AGCTGGGTGG AGAAGGGCCT CATGCCCGCC ACCGTGGACA CCCCGGGCGC GGAGACGCTC ATGTTCACGG GCAAGTCGGC GTTCTTCATG AACGGCGAGT GGGAGGTCAC GACCGCCCAG AGCATCGAGG GCCTGAACTT CGGCATGACC GCCTTCCCGA CCCTGTTCGA CCGGCCCGCC GCGCACGCCG ACTCCCACGC CTTCGTCCTG CCCCGCATGG AGCGCGACGA CGCGCAGCTG GAGCGGGCGA TGGGCTTCGT GAAGTCGCTG CTGGACCAGG GCATGACCTG GGCCGAGGGC GGGCACATCC CGACCTACCT GCCCACCTTC GAGAGCAGCG AGTACCAGCA GCTCGAACCG ATGTCGAACT ACGCCGACGC GGCCTCCTAC GCCTCCTACG ACCCGCCGGC CTGGTACTCC GGCTCGGGTT CGAACTTCGA GACCGTCACG GGCGCGACCA TCGGCCTCGT CCAGCAGGGC CTCACCAAGC CCGCGGACGC CGTCGCCGGC ATCCGCGCGG CGCTGGAGAA CTACGCCAAG ACGGCGAACC CGCTGTGA
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Protein sequence | MNSHPPTPRA RGALSRRNLL RGGLAAGGLG AVAATSGCGS PLAAGLAGTQ LNPGTVTFWN LFGGGDGARL QLMLDEYRRQ QGSTESLQAA TFAWGNPYYT KVSLATLGNK PPDVAVAHLT RASNLAAAGL LAPITDDVLA LAGLASSDFN ERAWEASKFE GQAYAIPLDT HPWVLFFNAD VCQAAGLLGP DGELAPIEGL EAWEAALTAG KEASGGFGAT TATVADDSNN WRFFNTVYSQ REGNTPLIDD EGLSVTMNDE LAVDTLATMR SWVEKGLMPA TVDTPGAETL MFTGKSAFFM NGEWEVTTAQ SIEGLNFGMT AFPTLFDRPA AHADSHAFVL PRMERDDAQL ERAMGFVKSL LDQGMTWAEG GHIPTYLPTF ESSEYQQLEP MSNYADAASY ASYDPPAWYS GSGSNFETVT GATIGLVQQG LTKPADAVAG IRAALENYAK TANPL
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