| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_0912 |
|---|
| Symbol | |
|---|
| ID | 5336814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | - |
|---|
| Start bp | 1376568 |
|---|
| End bp | 1377533 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | RNA methyltransferase, TrmH family, group 3 |
|---|
| Protein accession | YP_001360664 |
|---|
| Protein GI | 152964880 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0472746 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGGGA ACTCCCAGCG TCGCGGCGCT GTCAGCAAGG GCAAGAAGGG TCCGACCGTC
GGTTCCGGCG GCAAGAACCG CCGCAGCCTG GAGGGGCGGG GCCCGACGCC GAAGGCGAGC
GAGCGCCCGT ACCACCCGGC GGCGAAGGCG GCGGCCAAGG CCGCGCACAA GGCGGCCACG
ACGAACGGCC GCCCCGGCGG TCGTCCGCCG GCGCGGCGCA AGCCGGCCGG TGAGACCGAG
TGGATCGCGG GCCGGAACTC CATCGTCGAG GCGCTGCGCG CGGAACTGCC GATCACCGGC
ATCTACGTCG CCTCGCGCAT CGAGACGGAC GAGCGGGTCA AGGAGATCCT CGCCGCGGCG
GGCGACAAGG GCATCCCGCT GCTGGAGGCC TCCCGCCAGG ACCTCGACCG CCACACCGAG
AACGCCGTCC ACCAGGGCGT CGCGGCCACC GTCCCGCCCT ACGACTACGC CCACCCGATG
GACCTGCTGG ACCGCGCCGC GGACTCCGGT CGCCCGGCGC TGGTCGTCGC CCTCGACGGG
GTGACCGACC CGCGCAACCT CGGGGCGGTC GTCCGCTCGG TCGCCGCGTT CGGCGGGCAC
GGCGTCGTCG TCCCCGAGCG TCGCGCGGCC GGCATGACCG CCTCGGCGTG GAAGACGTCG
GCCGGGGCGG CGGCCCGCAC CCCGGTGGCG CGCGCGACGA ACCTCGTCCG CGCCATCGAG
GAGTACCAGA AGGCCGGGTT GTTCGTCGTG GGTCTCGACG CGGAGGGCGA CGTCCTGCTC
CCGCAGCTCA AGCTCGCCGA CGGTCCGCTC GTCCTCGTCG TCGGGGCCGA GGGCGCGGGG
CTGTCGCGGC TGGTGCGGGA GAAGTGCGAC CAGGTCGTCA GCATCCCGAT GGCCGGTGCC
TTCGAGTCGC TGAACGCGGG TGTCGCCGCG GGCATCGCGC TGTACGAGGT CGCCCGCCAC
CGCTGA
|
|---|
| Protein sequence | MAGNSQRRGA VSKGKKGPTV GSGGKNRRSL EGRGPTPKAS ERPYHPAAKA AAKAAHKAAT
TNGRPGGRPP ARRKPAGETE WIAGRNSIVE ALRAELPITG IYVASRIETD ERVKEILAAA
GDKGIPLLEA SRQDLDRHTE NAVHQGVAAT VPPYDYAHPM DLLDRAADSG RPALVVALDG
VTDPRNLGAV VRSVAAFGGH GVVVPERRAA GMTASAWKTS AGAAARTPVA RATNLVRAIE
EYQKAGLFVV GLDAEGDVLL PQLKLADGPL VLVVGAEGAG LSRLVREKCD QVVSIPMAGA
FESLNAGVAA GIALYEVARH R
|
|---|
| |