| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_0876 |
|---|
| Symbol | |
|---|
| ID | 5337108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 1412072 |
|---|
| End bp | 1413073 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001360628 |
|---|
| Protein GI | 152964844 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.679959 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00511053 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCGCT CCTCGACGCT GCGCCCGGGG CGGGACCCCG GGGTCGACGT GGAGGCCGCG
GGCTGCGTCG CGGTCCGGGC CGGCGCGGAG GGGGTGGAGG TGCTGCTGGT GCGCCGCCCC
GCCACCGCCA CCCGTCCCGC GGACTGGTCC TGGCCCAAGG GCAAGCTCGA CCACGGCGAG
CACCCCGCCG TGGCCGCCGT GCGCGAGACG GCCGAGGAGA CCGGGGTCCG GGTCCACCTG
GGCCCCGCCC TGCCCGAGCA GCGCTACCCG GTGGCCGGCG GGCTGCGCAA GCGGGTGCGC
TACTGGCTGG CGCGCCCGGC GGCCCCGGCC GACCCGGCCG TCGTCGACGC CGCCGACCCC
GACGAGATCG AGGAGTCCGC GTGGGTCTAC CCCGCGCGGG CCCGGGAGCT GCTGACCCAC
GCCGCCGACG TGGACCTCCT CGACGCGGCC CTGCCCGGCG GGCTCCCGCC GGAGCGCACG
TGGCCGCTGG TCGTGGTCCG CCACGCGCGG GCCGTCAAGC GCACCGACTG GCGCGGGCTG
GAGGGCGAGC GCCCGCTGCT GGAGCGCGGG CACGCGCAGT CGCGGGAGCT GGCGCCGCTG
CTGGCCTGCT TCGACCTGCG CCAGCTGGTC ACCTCCCCCT GGGCGCGGTG CGTGCAGACG
CTGCTGCCGG CGGCGGAGCT GCTGGGGCTG CCGCTCACCG AGGAGGACCC GCTCACCGAG
GCCGGCCACG AGACCGACCC GGACGGGGCG GTGAAGCTGC TCGAGGGGCT GCTCGCCGAG
GGCGCCGGGG TGGCGGTGTG CTCGCACGGG CCGGTGCTGC CGACGCTGCA GGGCGTGCTG
GCCGGGCGCG TCGACGGCGG CCGCGGGGGT GGCGACGGTG ACGGCACCGG GCGGGCGGCG
GTCCTGCGGC ACCGGCTGGG CAAGGCGGAG CTCGTCGTCG CCCACGTGGC CGACCGCGGC
TCGACCGCCC GGGTGGTCTC CGTGCAGCGT CACGGCGTCT GA
|
|---|
| Protein sequence | MSRSSTLRPG RDPGVDVEAA GCVAVRAGAE GVEVLLVRRP ATATRPADWS WPKGKLDHGE
HPAVAAVRET AEETGVRVHL GPALPEQRYP VAGGLRKRVR YWLARPAAPA DPAVVDAADP
DEIEESAWVY PARARELLTH AADVDLLDAA LPGGLPPERT WPLVVVRHAR AVKRTDWRGL
EGERPLLERG HAQSRELAPL LACFDLRQLV TSPWARCVQT LLPAAELLGL PLTEEDPLTE
AGHETDPDGA VKLLEGLLAE GAGVAVCSHG PVLPTLQGVL AGRVDGGRGG GDGDGTGRAA
VLRHRLGKAE LVVAHVADRG STARVVSVQR HGV
|
|---|
| |