| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_0536 |
|---|
| Symbol | |
|---|
| ID | 5335127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 1749339 |
|---|
| End bp | 1750604 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001360289 |
|---|
| Protein GI | 152964505 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.131848 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00419582 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCA GCAACAGCAC GCAGGAGAGC GGGACCCCCG CCCTCGCCAC GGGTCGCCGG
TCCCGCCGCG GCCCGATCAT CGGCGCGATC TTCCTGATGG CGACCTCGGC CATCGGGCCG
GGGTTCATCA CCCAGACCGC GACCTTCACC GCCACCCTCG GCGCGGCCTT CGCCTTCGCG
ATCCTCCTCT CGATCCTCAT CGACTTCGCC GTGCAGATGA ACGTCTGGCG GCTCATCACG
GTCACCGGCA AGCGCGCCGG TGACCTCGCC AACAGCGCCG TCCCGTTCAG CGGCCACGTC
CTGACCGTGC TCATCGTCGT CGGCGGCCTG GCCTTCAACA TCGGCAACAT CGCCGGCGGC
GGCCTGGGCC TGAACGCCCT GCTCGGCCTG GACCCCAAGG TCGGCGGCCT GCTCACCGCC
GTCCTGGCGA TCGCGATCTT CCTGTTCAAG CGCGCCGGGA CCGTCGTCGA CCGCGTCGTG
GTGGTGCTGG GCGTCGGCAT GATCGTCATG ACCGTGGTCG TCGCCGTCAT CTCCGCCCCG
CCCGTCGGGG ACGCCTTCCG GCAGACCTTC GTGCCCGACA CGGTCAACTT CGCGACCATC
ACCACGATCG TCGGCGGCAC CGTCGGCGGG TACATCACCT ACGCCGGGGC CCACCGCTAC
CTGGACTCCG GGCAGACCGG GGTCGAGCAC GTCCGCGACG TCCACCGCGC CTCGGTCACC
GGCATCCTCG TCACCGGGAT CATGCGCTAC GTCCTGTTCC TGGCCGTCCT GGGCGTCGTC
GCCTCCGGCG TCGTGCTCGA CCTGTCCGGC CAGGCGGCCA ACCCCGCCGG GCAGGCCTTC
GGCGCCGTCC TCGGTGACGC CGGCATCCGC ATCTTCGGGG CGATCTTCTG GGCCGCGTCG
ATCACCTCCG TCATCGGCGC CGCGTACACC TCCTCGACGT TCCTCTCGAC GTTCTCCCGC
CGCCTGGCCG GCGGGTGGCC GCTGCAGCTG ACCACCGTCG CCTTCATCGT CGTCTCGCTG
GTCGTCTACC TGGCCATCGG CACCGCGCCG GCCGCGCTGC TCGTGTTCGT CGGCGGGTTC
AACGGGCTGA TCCTCCCGAT CGGGATGACG GTGTTCCTCT ACATCGGCTG GTTCCGCCAG
CGCGACGTCC TGGGCGGGTA CGCCTACCCG AAGTGGCTGC TCGTCGTCGG CACGATCGCG
CTGGCCATCA GCTACTACAT GGCCTCGCGG TCCATCGGCC CCGTCTTCGA CTTCCTGTCC
GCCTGA
|
|---|
| Protein sequence | MTGSNSTQES GTPALATGRR SRRGPIIGAI FLMATSAIGP GFITQTATFT ATLGAAFAFA
ILLSILIDFA VQMNVWRLIT VTGKRAGDLA NSAVPFSGHV LTVLIVVGGL AFNIGNIAGG
GLGLNALLGL DPKVGGLLTA VLAIAIFLFK RAGTVVDRVV VVLGVGMIVM TVVVAVISAP
PVGDAFRQTF VPDTVNFATI TTIVGGTVGG YITYAGAHRY LDSGQTGVEH VRDVHRASVT
GILVTGIMRY VLFLAVLGVV ASGVVLDLSG QAANPAGQAF GAVLGDAGIR IFGAIFWAAS
ITSVIGAAYT SSTFLSTFSR RLAGGWPLQL TTVAFIVVSL VVYLAIGTAP AALLVFVGGF
NGLILPIGMT VFLYIGWFRQ RDVLGGYAYP KWLLVVGTIA LAISYYMASR SIGPVFDFLS
A
|
|---|
| |