| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_0475 |
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| Symbol | |
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| ID | 5335993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kineococcus radiotolerans SRS30216 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009664 |
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| Strand | - |
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| Start bp | 1818174 |
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| End bp | 1820210 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | |
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| Product | penicillin-binding protein transpeptidase |
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| Protein accession | YP_001360229 |
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| Protein GI | 152964445 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00366439 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0371548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGA ACGCCGACGA GCCCCGCCCG TCCTCCACCC CGCCCCCGGC CGCGCCGGCC
GCCGCCCCGG CCGCTGACCT GCGCCGCCGC CCCCGGCGGC GCGCCGTCGT CGCCGGCTCC
GCCGCCGCCG CGGTCCTCGC CGGCGGTGGG GCGCTGTGGT GGTCGCGCTC GCGCCGGGAC
CCGGCGGCGG GCGTCGAGGA CGCCGCCCGG TCGGTGGCGC AGGCCTGGTC GCAGGGGAGC
TTCGGGCAGC TCGACGCCGT CGCCGCCCCG GGCGGGACGC TCCCCGCGGA CCTCGGCGCC
GAGTACGCCC GCCTCACCGG CCCCCTCTCC GACCCGCCGC CGAGGGTGAC CCTCGCCGCG
GTGGACACCG CGACCGCGGA GGAGGGGACC GCGACCGCGA CGCTGGACGT GTCCTTCGAC
CTCGCCGCCG GCCACGGCGC CCCCGGGGGG AGCGTCTTCG CCTACCCCAC GACCCTGCGC
CTCGCCCGCT CCGGGGAGGG CGACGAGGCG ACGTGGCGGC CGGTCTGGGA ACCCGCCCTC
GTCCACCCGC GGCTGGCGTC GGGGGCGACG TTCGCCGTGG AGCGCGAACT GCCCCCGCGC
GCCGACGTCC TCGGCCGCGA CGGTTCCCCC GTCGTGACCG CGACCCCCGT CGTCCGGGTG
GGGGTGCAAC CCTCGCGGAC GACCGACCCG GCGGCGACGG CCGGCGCCCT CGCCGCGGCC
CTCGGCGTCG ACGCGGCCGC CCTGACGACC CGGGTCCAGC AGGCCGCGCC CGACGCCTTC
GTGGACGTCA TCACGTTGCG CCGCAGCGAC TACGACGCCC AGCGCGACGT CCTGCGACCC
GTGCCCGGTG CGGTGTTCGC GGAGTCGACG CTGCCCCTGG CCCCCACCCG CGGTTTCGCC
CGCGCCCTGC TGGGGAGCGT GGGCCCGGCC ACCGCGGAGA CCATCGAGGC CGCCGGGGGC
CGCTACGCCG CGGGGGACCT CGCGGGGCTG TCGGGGGTGC AGGCGGTCCA CGACGAACGC
CTCGCCGGAC GGGCCGGGAT CGTGGTGCGC GCCGAGGGCG GCGGCGACGC GACCTCGGCG
GAGCTGTTCC GCGTCGACCC CCTCCCGGGA CGGCCCGTGC GGACGAGCCT GGTCGAGCAC
GTGCAGCGGG CCTCCGACGA CGCGCTCGCG GCCAGCCCGG CCGACGCGGC CCTCGTCGCC
GTCGACGTCG CGACCGGGGA CGTGGTGGCG GTGTCGAACT TCCCCGTCGA CGGCGGGGAC
CGGGCCCTGA CCGGGCGCTT CCCGCCCGGG TCGACGTTCA AGGTGGTGAC CACCCTGGCG
CTGCTCGGCG ACGGGCTGGA CGTCGAGGAG AACGTGCCCT GCGCCCCCAC GTACACCGTG
GAGGGCCGCA CCTTCTCGAA CTTCGAGGAC GAGGCGTTCG GGGACGTCCC CTTCCGCACC
GACTTCGCCC GCTCCTGCAA CACGGCGTTC GCGAGCCTGA GCACGCGCCT GGGCGACGAC
TCGCTGCCGA CCGCCGCCGC CCAGCTCGGG ATCGGGGCCC CGTGGGCGGC CGGAGTCGAC
GCCTTCGAGG GGTCCGTGCC CGTCGCGGAG TCCGCGGTCG ACCTGGCCGC CGCGAGCTTC
GGGCAGGGAC GCACCCTGGT CAGCCCGCTG GCGGTGGCGG TGGCCGCGGC CTCCGTCGCC
GCGCGCGAGC TGAGGGTCCC CGCCGTCGTC CTGGACCCGG CTCCCGCCGC CCCCTCCGCC
CCGGCGAGCG CCGCGGACCC GGCGCTGCTG GGGACCCTGG CCGACCTCAT GCGCGACGTC
GTGACGGCGG GGACGGCCAC CGTGCTCGCG GGGGTGCCGG GCGAGCCGGT GCACGCCAAG
ACCGGCACGG CCGAGCACGG CACGGCGGTG CCCCCGGCCA CGCACGCCTG GACCACCGGT
TTCCAGGGCG GGCTGGCCTT CGCGGTGTTC GTCGCGGACG GGGTGAGCGG AGGGGCGGTC
GCGGCCCCGC TGGCCGCCGA CTTCCTGCGC CGGGTGGCGG CCTCCGGGGG GTTCTGA
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| Protein sequence | MTENADEPRP SSTPPPAAPA AAPAADLRRR PRRRAVVAGS AAAAVLAGGG ALWWSRSRRD
PAAGVEDAAR SVAQAWSQGS FGQLDAVAAP GGTLPADLGA EYARLTGPLS DPPPRVTLAA
VDTATAEEGT ATATLDVSFD LAAGHGAPGG SVFAYPTTLR LARSGEGDEA TWRPVWEPAL
VHPRLASGAT FAVERELPPR ADVLGRDGSP VVTATPVVRV GVQPSRTTDP AATAGALAAA
LGVDAAALTT RVQQAAPDAF VDVITLRRSD YDAQRDVLRP VPGAVFAEST LPLAPTRGFA
RALLGSVGPA TAETIEAAGG RYAAGDLAGL SGVQAVHDER LAGRAGIVVR AEGGGDATSA
ELFRVDPLPG RPVRTSLVEH VQRASDDALA ASPADAALVA VDVATGDVVA VSNFPVDGGD
RALTGRFPPG STFKVVTTLA LLGDGLDVEE NVPCAPTYTV EGRTFSNFED EAFGDVPFRT
DFARSCNTAF ASLSTRLGDD SLPTAAAQLG IGAPWAAGVD AFEGSVPVAE SAVDLAAASF
GQGRTLVSPL AVAVAAASVA ARELRVPAVV LDPAPAAPSA PASAADPALL GTLADLMRDV
VTAGTATVLA GVPGEPVHAK TGTAEHGTAV PPATHAWTTG FQGGLAFAVF VADGVSGGAV
AAPLAADFLR RVAASGGF
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