Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_0398 |
Symbol | |
ID | 5333485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 1901350 |
End bp | 1903212 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | VanW family protein |
Protein accession | YP_001360152 |
Protein GI | 152964368 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.151032 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.03789 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCGAACA CCGACCAGCC GGCGCAGCAG GAGACGGGCC GCGGGGGGAC CCGGCCGTCG CCGCGGTCCT GGGCGCGGCG ACCGCGCACC TGGGTCCTCG CCGGCGCCGT CGTCGTCGTC GCGGGCGGGT ACACCGCCGC GGCCCTGGCC CTCGGCGGGC ACGCCCCGCG CGGGACGACC GTGCTCGGCG TCGACGTCGG CGGGATGGAC CGCGGCGAGG TCGAGCGGGC CGTCGGCGCC GCCGCCGGCG AGCGCGGGAC CCGGCCGGTG GCCCTCCAGG TCACCGGGGC CGGCGCCTCC GCCACGGGGG AGGTCGTCCC CGCGCAGGCG GGCCTCTCCG TCGACCCCGC CGGCACCGCC GCGGCGGTCA CCGCCCCCGC CTGGACCCCG GCCGCGCTGT GGGAGCACGT CGCCGGCGCC GGGGAGGTCG CGCCCGACGT CGACGTCGAC ACCGGCGCGC TGCGGGCCGC CCTCCAGCCG CTGGCCGACT CCGTCGCCGT CGCCCCCGTC GAGGGGGCGG TCACCTTCGA CGTCCGCCCC GACGGCAGCG TCGAACCCGC CGTCGCCGCC CCCCAGGAGG GCCGTTCCCT CGACGTCACC GCCGCCGCCG GCCGCGTCGC CGGCGCCTGG CTGGAGCCCG GGCCGGTGCG CCTGGAAGCC GCCGTGGAGC GGCCCTCGCT GGACGCCGAG GGCCTCGACG CGGCCGTCGA CGCCCTCGCC CGGCCCGCCG TCGCCGCCGA CCTCGTCGTC GCCGGCGGGG GCCGCGACGT GACCCTCGCC CCCGCGGCCT TCGCCCCGGC GCTGGCCGTG CGCCCCGTGG ACGGCGAGGC CGCCCTCGTC GCCGACGGCG CGAGGCTGCA GGCCGCCCTC GTCGCGGCCG ACCCGCAGTT CGAGACCCCG CCGCAGGACG CCCGCATCGC GATCGACGGC GAGGTGCCCC GGGTGGTCCC CGCCGTCACC GGCCGCGCCG CCCCCCCGGA GGACCTCGCG CGCGCCGTGA CGACGGCGCT CACCGGCACC ACCCCGACCC GCCGGGCCGA GGTGGAGCTC ACCGAGTCCC AGCCCGCCCT CACCACCGAG GCGCTGCAGT CGCTGGGCAT CGTCGAGCGG ATCTCCACGT TCTCGACGAA GCTCACCGCC AACGCCGACC GCACCGACAA CATCCGGATC GCCGCCGGGC ACGTGGACGG GACGATCCTG CAGCCGGGGC AGGAGTTCTC CCTCAACGAC ACCGTCGGCG AGCGCACCCC CGAGCGGGGC TTCCACCGCG CCCCCGTCAT CTCCGGCGGG CGCCTCGTCG ACGACTACGG CGGCGGGGTC TCCCAGCTCT CGACGACCCT GTTCAACGCG GTCTTCTTCG CCGGCCTCGA CGAGATCGAG CACAAGCCGC ACTCGTTCTA CATCTCCCGC TACCCCGAGG GGCGCGAGGC CACGATCGAC TGGCGCAGCA TCGACAACCG CTTCCGCAAC GACTCCGGGC ACGGGGTGTA CGTCCAGGCC GGGATCGTCG GCGACCAGCT CGTCGTGTCG ATGTACGGGA CGAGGTTCAT GGACGTCACG GCGCAGAAGT CCGCCCGCCG CAACGTCAAG CCCGCCCGCA CGATCTACGA CACGTCGAGG GGGTGCTCGC CGAGCTCGGC CACCAGCACC GGCTTCACCG TCGACGTCAC CCGGGTCATG ACCCCCGTCG GGGGCGGGGC GCCGCAGCGC GAGACGTGGA CGACGGTCTA CAACCCCGAG AACCGGATCG TCTGCGGGCC GGACCCCGCG ACGGTGCGGC CCGCGCCGGA GCCCACGCCC GCCGCCCCGG CCCCGCCGGC CGTCCCGGCG CCCGCCGCGC CCGCGCCGAC CCCGGCCGGG TAG
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Protein sequence | MPNTDQPAQQ ETGRGGTRPS PRSWARRPRT WVLAGAVVVV AGGYTAAALA LGGHAPRGTT VLGVDVGGMD RGEVERAVGA AAGERGTRPV ALQVTGAGAS ATGEVVPAQA GLSVDPAGTA AAVTAPAWTP AALWEHVAGA GEVAPDVDVD TGALRAALQP LADSVAVAPV EGAVTFDVRP DGSVEPAVAA PQEGRSLDVT AAAGRVAGAW LEPGPVRLEA AVERPSLDAE GLDAAVDALA RPAVAADLVV AGGGRDVTLA PAAFAPALAV RPVDGEAALV ADGARLQAAL VAADPQFETP PQDARIAIDG EVPRVVPAVT GRAAPPEDLA RAVTTALTGT TPTRRAEVEL TESQPALTTE ALQSLGIVER ISTFSTKLTA NADRTDNIRI AAGHVDGTIL QPGQEFSLND TVGERTPERG FHRAPVISGG RLVDDYGGGV SQLSTTLFNA VFFAGLDEIE HKPHSFYISR YPEGREATID WRSIDNRFRN DSGHGVYVQA GIVGDQLVVS MYGTRFMDVT AQKSARRNVK PARTIYDTSR GCSPSSATST GFTVDVTRVM TPVGGGAPQR ETWTTVYNPE NRIVCGPDPA TVRPAPEPTP AAPAPPAVPA PAAPAPTPAG
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