| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_0368 |
|---|
| Symbol | |
|---|
| ID | 5333514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | - |
|---|
| Start bp | 1936290 |
|---|
| End bp | 1937489 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
|---|
| Protein accession | YP_001360122 |
|---|
| Protein GI | 152964338 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00562308 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.495103 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACCA CCCACCGCCC CGCCCGCCGC ACCGCCGCCC TGGCCGCCGC GCTGCTGAGC
ACCGCGCTCA TCGGCACCGC CGCCTCCGCC GGCGCCGCTC CCCCCGCCGC GACCGGTGCG
GCCACCACGA CGAGCGCGGC CGCGGGCACC CACCACCGCT CGCCCGCCGT GCAGCACAGC
CTCGACGCCC TCGTCCGCGA CGACGGCCTG CCCGGGGCGC TGGCCGCGGT CCGCGAGCGC
AGCGGCCGCG TCACCGACTA CACCGCCGGG GTCCGCGACG TCGTCAGCGG GAAGCCGATC
CAGCCCGACA GCCGGATCCG CATCGCGAGC AACACGAAGA CCTTCACCGC CACCGTCGTG
CTGCAGCTGG TGGGGGAGGG GGAGGTCGTC CTGGACGAAC CCGTCGAGAC CTACCTGCCG
GGGGTCGTGC GCGGCCCGGG CGGGGACGGG CGTTCCATCA CCGTCCGCCA GCTGCTGCAG
CAGACCAGCG GCCTGCCCGA CTACGACACC CTCGTCCTGG GCACCGACCT GGTGTCGGTG
CGGCACACCT ACTTCGAACC GTCGCAGCTG CTGCAGGCGG CGCTGGATCA GCCCGCCTCC
TTCGCCCCCG GCACGAGGTT CGAGTACTCC AACACGAACT ACGTCGTCGC CGGGCTGCTG
GTGCAGCGGG TCACGGGGCG CCCCATCGGT GAGCAGATCA CCGAGCGGAT CATCGAGCCG
CTGCACCTGC GCGACACCTA CTGGCCGACC ACCGGGGACC AGGACATCCG CGGCCGGCAC
CCGCAGGGCT ACGACCTGGA CACCGCCGCG ACACCCGTCG ACGTCACCGA CACCGACCCC
TCGCTGGGCT GGGCGGCGGG GCAGCTGATC TCCACCCCCT CCGACCTCGC GCGGTTCCTC
GACGCCCTCG TCGGCGGGGA ACTGCTCGCC CCCGCGGAAC TCGAGCAGAT GCGGACCACC
GTCCCCGCAC CCGGTTTCGA ACCCCAGGGG GAGTGGGCCT ACGGCCTGGG CCTGGCCCGG
ACCACCCTCA GCTGCGGGCT GGAGGCCTGG GGCCACGGCG GGGACATCCA GGGCTTCGAG
ACCCGCAACC TCGTCACCAC CGACGGGCGC GCGGCCGTCG TCGCCGTCAC CGCGCTGCCC
CGGACGCTGG AGGCGATCGG GCGCGTCGAC GCCGCCGTGG ACACCGCCCT CTGCTCCTGA
|
|---|
| Protein sequence | MPTTHRPARR TAALAAALLS TALIGTAASA GAAPPAATGA ATTTSAAAGT HHRSPAVQHS
LDALVRDDGL PGALAAVRER SGRVTDYTAG VRDVVSGKPI QPDSRIRIAS NTKTFTATVV
LQLVGEGEVV LDEPVETYLP GVVRGPGGDG RSITVRQLLQ QTSGLPDYDT LVLGTDLVSV
RHTYFEPSQL LQAALDQPAS FAPGTRFEYS NTNYVVAGLL VQRVTGRPIG EQITERIIEP
LHLRDTYWPT TGDQDIRGRH PQGYDLDTAA TPVDVTDTDP SLGWAAGQLI STPSDLARFL
DALVGGELLA PAELEQMRTT VPAPGFEPQG EWAYGLGLAR TTLSCGLEAW GHGGDIQGFE
TRNLVTTDGR AAVVAVTALP RTLEAIGRVD AAVDTALCS
|
|---|
| |