| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_0128 |
|---|
| Symbol | |
|---|
| ID | 5336433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | - |
|---|
| Start bp | 2188103 |
|---|
| End bp | 2188930 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | Chloride peroxidase |
|---|
| Protein accession | YP_001359883 |
|---|
| Protein GI | 152964099 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00372982 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.30723 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCACCA TCACCGTCGG CCAGGAGAAC TCGACCCCGG TCGAGCTGTA CTACGAGGAC
CACGGGACCG GCCAGGCCGT CGTCCTCATC CACGGCTACC CCCTCGACGG GTCCTCCTGG
GAGCGCCAGG CCCGCGAGCT GCGCGCCGCC GGGTACCGGG TCGTCACCTA CGACCGCCGC
GGGTTCGGCC GCTCCTCCAA GGTCGAGACC GGCTACGACT ACGACACCTT CGCCGCCGAC
CTGAACGCCG TCCTCACCAC CCTGGACCTC ACCGACGTCG TCCTCGTCGG GTTCTCCATG
GGCACCGGCG AGCTCGCCCG CTACGCCAAG CTCTTCGGCA CCGAGCGCAT CGCGAAGTTC
GCCTTCCTCG CCTCCCTGGA ACCCGGGATG CTCGGGCAGG GCGTGCCGCA GTCGCTGTTC
GACGGCATCG AGGCGCAGGC CAAGGCCGAC CGCTTCGCCT GGTTCACGGC CTTCTACCAG
GACTTCTACA ACCTCGACGA GAACCTCGGC ACGCGCATCT CCCAGCAGGC CGTGGACGCG
AGCTGGAACA CCGCCACCGC CAGCGCCCCG GTCGCCGCCC ACGCCGTCGT CCCCACCTGG
GTCGAGGACT TCACCGCCGA CGTCGCCGCC GTGCGCGCCA GCGGCAAGCC CACCCTCATC
GTCCACGGCA CCGCGGACCG CACCCTGCCC ATCGACGCCA CCGGGCGCCC CTTCCACGCC
GCCTTCCCCG AGGCGCACTA CCAGGAGATC GAGGGCGCCC CGCACGGGAT GCTCTGGACC
CACGCCGACG AGGTCAACGC GGTCCTGCTG CCCTTCGTCC AGGCGTAA
|
|---|
| Protein sequence | MGTITVGQEN STPVELYYED HGTGQAVVLI HGYPLDGSSW ERQARELRAA GYRVVTYDRR
GFGRSSKVET GYDYDTFAAD LNAVLTTLDL TDVVLVGFSM GTGELARYAK LFGTERIAKF
AFLASLEPGM LGQGVPQSLF DGIEAQAKAD RFAWFTAFYQ DFYNLDENLG TRISQQAVDA
SWNTATASAP VAAHAVVPTW VEDFTADVAA VRASGKPTLI VHGTADRTLP IDATGRPFHA
AFPEAHYQEI EGAPHGMLWT HADEVNAVLL PFVQA
|
|---|
| |