| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_0119 |
|---|
| Symbol | |
|---|
| ID | 5337692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | - |
|---|
| Start bp | 2196449 |
|---|
| End bp | 2198722 |
|---|
| Gene Length | 2274 bp |
|---|
| Protein Length | 757 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | alpha-L-rhamnosidase |
|---|
| Protein accession | YP_001359874 |
|---|
| Protein GI | 152964090 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0916317 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACCT GGCAGGCCAC GATGATCGCC GCGGACGGCG ACGCCGACCG CGACGGCGCC
CCGCTGCTGC GGCGCCGGTT CACCCTCGAC GACGGCCACG GCGCGGTCCG CGACGCCGTC
CTGCACGTCA CCGCCCAGGG CGTCGTCGAG ACGTTCCTCG ACGGGCGGGC CGTCTCCGGT
GACGTCCTCA GCCCCGGGTG GAGCAGCTTC GAGTGGCGGC TGCGGTACCG CACCCACGAC
GTCACCGCGG CGCTGAGCAC GGGACCCGAG CACGTCCTGG GGCTGGCCCT GGGCAACGGG
TGGTTCCGCG GCCGGCTCGG CTGGAACGGC GGCCGCGCGT ACTACGGCGA GGACCTGGGG
GGTTTCGCGC AGCTGGAGGT GACGTTCGCC GACGGGCACG TCCAGACCCT CGTCACCGAC
GGGACGTGGG AGTCGCACGC CTCCGCGGTC ACCGCGAACG ACCTCTACGA CGGGCAGGAC
GTCGACGCCC GCCTCCTCGA CCCCGCCTGG GCCACCACCG CCGGCACCGA CGACGGCTGG
GGCGGGGTGC GGGCGCTGGA GTTCGACACC GCGCTGCTCA CCGAGCACGT CGGGCCCCCG
GTGCGCCGCC AGGAGGTCCT GCCCGCGCAG CGGGTGTGGA CGTCCCCGTC GGGCAGGACG
CTGGTGGACT TCGGGCAGAA CCTCGTCGGC TGGCTGCGGT TCACCGTGCG CGGCGAGGCC
GGGCAGGTCG TCACCCTGCG CCACGCCGAG GTGCTGGAGG ACGGCGAGCT GGGCGTGCGC
CCGCTGCGCA CCGCGAAGGC CACCGACACG TTCACCCTCT CCGGCGGCGA CGACGTCTTC
GAACCCACGT TCACGTTCCA CGGGTTCCGC TACGCCGAGG TCGACGGGTG GCCCGGGGAA
CTGCGCACCG ACGACCTCGA AGCCGTCGTC GTGCACTCCG AGCTCGAACG CACCGGCGAG
TTCGAGTGCT CCGACGAGAT GCTGAACCAG CTGCACCGCA ACGTCGTGTG GGGGACGAAG
GGGAACTTCC TCGACGTCCC CACCGACTGC CCGCAGCGCG ACGAACGGCT CGGCTGGACC
GGCGACCTCG CCGTGTTCGC CCCCACCGCG GCGTACCTGT ACGACGTGGA GGGTTTCCTG
CGCGACTGGA TGCGCGACCT GGCCGCCGAG CAGGCCGCCC GCGACGGCCT CGTCGCGTTC
GTCGTCCCCG ACGTGCTGAA GCACTCCCCG CCCATCGGGG CGTTCCCCGA CCCCGACAGC
ACCGCCGTCT GGTCCGACGT CGCGGTGTGG CTGCCGTGGG CGCTGTGGGA GGCGTACGGC
CGGCGGGACC TGCTCGCCGA GCACTACCCG GCGATGACCG CCCACGTCGA GCGGGTCCTG
ACCCTGCTGT CCCCGCAGGG GCTGTGGGAC ACCGTGTTCC AGTTCGGCGA CTGGCTCGAC
CCCGACGCCC CGCCGGAACG CCCCGCCGAC GCCAAGGCCG ACAAGGGCGT CGTCGCGACC
GCCTGCCTGT TCCGCTCGCT GCGCACCGTC GCCGACGCCG CCCGCGTCCT GGGGCACACG
GGCGACGCCG AGCGGTTCGA CGCCGCCGCC GCGCGGATCC GCACGGCGTT CCTGGAGCAC
TACGTCGACG AGCAGGGCCT CGTCCTGTCC GACTGCGCCA CCGTCTACGC GCTCGCGATC
GAGTTCGGGC TGCTGACCGG GGCGCAGCGG GAGTGGGCCG GGCAGCGCCT GGCCGAGATC
GTCGAGAAGG CCGGGTACCG CGTCTCCACC GGTTTCGCCG GGACCCCGTA CGTGACCGGC
GCACTGTCCG GCACCGGTCA CCTCGACGCG GCCTACCGGC TGCTCACCGA GCGGAAATGC
CCGTCGTGGC TGTACCCGGT GACGATGGGC GCCACGACGA TCTGGGAGCG GTGGGACTCC
ATGCTGCCCG ACGGGTCCAT CAACCCCGGG GAGATGACGA GCTTCAACCA CTACGCCCTG
GGGGCCGTCG CGGACTGGAT GCACCGGGTC GTGGCCGGGC TGTCCCCGCT GGAACCGGGG
TACCGCCGGG CGCTCGTCGC CCCCCAGCCC GGTGGCGGCC TCACCTGGGC GCGCGGTTCC
CTGCGGACCC CGCACGGGAA CCTCGCCGTG CGCTGGGAGC AGGGCGAGGC CGGTCTGGTC
GTCGACGTGG AGGTGCCCGC GGGGACGACC GCGGTGCTGC GCCTGCCCGG TGAGGCCGAC
CGGGAACTGC CCGCCGGCAC CCACCGGGTC ACGGCGGCGC TCACCGCCCC CTGA
|
|---|
| Protein sequence | MPTWQATMIA ADGDADRDGA PLLRRRFTLD DGHGAVRDAV LHVTAQGVVE TFLDGRAVSG
DVLSPGWSSF EWRLRYRTHD VTAALSTGPE HVLGLALGNG WFRGRLGWNG GRAYYGEDLG
GFAQLEVTFA DGHVQTLVTD GTWESHASAV TANDLYDGQD VDARLLDPAW ATTAGTDDGW
GGVRALEFDT ALLTEHVGPP VRRQEVLPAQ RVWTSPSGRT LVDFGQNLVG WLRFTVRGEA
GQVVTLRHAE VLEDGELGVR PLRTAKATDT FTLSGGDDVF EPTFTFHGFR YAEVDGWPGE
LRTDDLEAVV VHSELERTGE FECSDEMLNQ LHRNVVWGTK GNFLDVPTDC PQRDERLGWT
GDLAVFAPTA AYLYDVEGFL RDWMRDLAAE QAARDGLVAF VVPDVLKHSP PIGAFPDPDS
TAVWSDVAVW LPWALWEAYG RRDLLAEHYP AMTAHVERVL TLLSPQGLWD TVFQFGDWLD
PDAPPERPAD AKADKGVVAT ACLFRSLRTV ADAARVLGHT GDAERFDAAA ARIRTAFLEH
YVDEQGLVLS DCATVYALAI EFGLLTGAQR EWAGQRLAEI VEKAGYRVST GFAGTPYVTG
ALSGTGHLDA AYRLLTERKC PSWLYPVTMG ATTIWERWDS MLPDGSINPG EMTSFNHYAL
GAVADWMHRV VAGLSPLEPG YRRALVAPQP GGGLTWARGS LRTPHGNLAV RWEQGEAGLV
VDVEVPAGTT AVLRLPGEAD RELPAGTHRV TAALTAP
|
|---|
| |