Gene Krad_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_0118 
Symbol 
ID5337691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp2198745 
End bp2201450 
Gene Length2706 bp 
Protein Length901 aa 
Translation table11 
GC content77% 
IMG OID 
Productalpha-L-rhamnosidase 
Protein accessionYP_001359873 
Protein GI152964089 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00141088 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.763429 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGGAC CCCCCGTGCC CCACCGCCCC GACGTCACCC TCACCGACCT GCGCGCCGAG 
CACGGCCGGC CCGCGCTCGG CCTGGGCACC GCCCGCCCGC GCCTGTCCTG GATCGCCCGC
CCCACCGGCG CGACCCCGCC CGCGTGGCGA CAGACCGACC ACGAGGTGCG CGTCACCGCC
GTGCCCGTCG TCCCCGGCGC GGCACCGCGC GCGTGGACCA GCGGGCGGAC CGGGTCCGGC
GACAGCGTCC TCGTGCCCTG GCCGGCGCCC GACCTCGCCT CGCGCGAACG GGTCCGCGTG
CAGGTCCGCG CCTGGAGCGC GGACCACCCC GACCCCACCG CGTGGAGCGC GCCGCTGGAG
GTCGAGACCG GCCTGCTGCA CCCCGGCGAC TGGGCCGCCG TCCCCGTCGG CCCGGACTGG
GAGGAGGAAC CCGGAACCGA CCACCGCCCC GCCCTGCTGC GCCGGGAGTT CCACCTGCCC
GGCCCCGTCG CCCGCGCGCG CCTGCACGTC ACCGCGCACG GCGTCCACGA GGTCGAGGTC
AACGGCACCC GCGTCGGCGA CGAGGTCCTC GCGCCGGGCT GGACGAGCTA CCACCACCGG
CTGCGGCACC GCACCCACGA CGTCACCGCG CACCTGCGCG AAGGGGCGAA CGCCCTCGGG
GCGTGGCTGG CCGACGGCTG GTACCGCGGC CGGTACGGCA CCCACGGCGG GAACCACGAC
CTGTACGGCA CCCGCACCGC GCTGATCGCC CAGCTGGAGG TGGACCTGGC CGACGGCCGC
CGCGTCGTCG TCACCACCCA CCCCGGCGCC GGGGCCGACG GGGGCACCTG GCGCGCCGCG
CACGGCCCGA TCACCGCCGC CAGCCTCTAC GACGGCGAGG AGTTCGACGC CCGGCTCGCG
GTCCCGGGGT TCTCCCGCCC CGGGTTCGAC GACTCCGCCT GGGCCGGGGT GCGCGGGTAC
GAGCGCGACC CGGCGACCCT GGTGGCCGCG CAGGGCCCGC CGGTGCGCTG CACCCGGGAA
CTGCGGCCGG TGTCCGTGCT CACCACGCCC TCGGGGGCGA CGGTCCTGGA CTTCGGGCAG
AACCTCGCCG GGCGGGTGCG GATCCGCGTC CGCGGGAACG CCGGGGACCG CGTCCGGCTG
CGCCACGCCG AGGTCCTCCA GGACGGTGAG CTGTGCACCC GGCCGTTGCA GCGGGCCCGC
GCCACCGACA CGTACGTCCT GGCCGGGGAC CCGGCCGGGG AGGAGTGGGA ACCGCGGTTC
ACGATGCACG GGTTCCGCTA CGTCGAGGTC ACCGGCTGGC CCGGGCGGCT GGGCGAGGAG
GACGTCGTCG CGCGCGTCCT GCACTCCGAC CTGGAGCGCA CCGGCTGGTT CACCTGCTCC
GACGAGCGGC TGAACCGGCT GCACGAGAAC GTCGTGTGGT CGATGCGCTC GAACTTCGTC
GACGTGCCCA CCGACTGCCC CCAGCGCGAC GAGCGGCTCG GCTGGACCGG GGACGTGCAG
GTGTTCGGCC CCACCGCCGC TTTCCTCTAC GACGTGGGGG GTTTCCTGGC GAGCTGGCTG
GCCGACGTGG CGGTCGAGCA GCTGCCCGAC GGGACCGTGC CCTGGTACGT GCCGATGATC
CCCGCCGAGT TCTGGGACCC GCCGCAGCCG GGCGCGGTGT GGGGTGACGT CGCGGTGCTG
TTGCCCGCGG TGCTGCACGA GCGGTTCGGC GACACCGGCG TCCTGCGCCG CCAGTACGCC
TCCGCCCGCG CCTGGGTGGA CCTCGTCGAG CGCCTCGCGG GGCCGTCGAG GTTGTGGAAC
ACCGGGGTGC AGCTGGGCGA CTGGCTCGAC CCGGCGGCCC CGCCGGAGGA ACCGGCCGCG
GCCCGCACCG ACAAGTACCT CGTGGCGACC GCCTACTTCG CGCACTCGGC CCGCACCCTG
GCCCGGATCG CCGGGGTGCT GGGGGAGGAG GCTGACGCGG CCCGCTACGC ACGGCTGGCG
GCCGAGGTCC GCGAGGCGTT CACCCGCGAG CACGTCCGCG CCGACGGCCG GCTGTCCAGC
GACGCGCAGA CCGCCTACGC CCTCGCCCTC GCGTTCGACC TGCTGGACGA GCCGCGGCGC
GAGACCGCCG GGCGGCGCCT GGCCGAGCTC GTCGCGCAGG ACGGCAACCG CGTCGCCACC
GGCTTCGCCG GGGTGAACCT CGTCACCGAC GCCCTCACCC GGACCGGCCA CGACGCGACC
GCGTTCGCGC TGCTCACCGA GACGGGCTGC CCGTCCTGGC TGTACCAGGT GTCGATGGGC
GCGACGACGA CGTGGGAGCG GTGGGACTCG CTGCTGGCCG ACGGGACCGT GAACCCCGGG
CACATGACGA GCTTCAACCA CTACGCGCTC GGGTCGATCG CGGACTGGGT GCACCGCACC
GTCGCCGGGC TCGCCCCGGC CGCCCCCGGC TACCGGCGGC TGCTGGTGCG GCCCCGCCCC
GGCGCGGGTC TCACCGCCGC CTCGGCCCGC CACGAGACCC CGTACGGGCC GGCCTCGGTG
GCGTGGAACC GCCGCGACGG CGAACTCGTC GTCGACGTCG ACGTCCCCCT CGGGGTCACC
GCCACGGTCG ACCTGCCCGG CCGCCCCGCC ACCGAGGTCG GCGCCGGGCA CCACCGCTTC
GCGGTCCCCG ACGCGGTCCC CGCCCTGCCC GGCCCCGGCG CCCCCAGCGC GCTGCAGCCC
ACCTGA
 
Protein sequence
MNGPPVPHRP DVTLTDLRAE HGRPALGLGT ARPRLSWIAR PTGATPPAWR QTDHEVRVTA 
VPVVPGAAPR AWTSGRTGSG DSVLVPWPAP DLASRERVRV QVRAWSADHP DPTAWSAPLE
VETGLLHPGD WAAVPVGPDW EEEPGTDHRP ALLRREFHLP GPVARARLHV TAHGVHEVEV
NGTRVGDEVL APGWTSYHHR LRHRTHDVTA HLREGANALG AWLADGWYRG RYGTHGGNHD
LYGTRTALIA QLEVDLADGR RVVVTTHPGA GADGGTWRAA HGPITAASLY DGEEFDARLA
VPGFSRPGFD DSAWAGVRGY ERDPATLVAA QGPPVRCTRE LRPVSVLTTP SGATVLDFGQ
NLAGRVRIRV RGNAGDRVRL RHAEVLQDGE LCTRPLQRAR ATDTYVLAGD PAGEEWEPRF
TMHGFRYVEV TGWPGRLGEE DVVARVLHSD LERTGWFTCS DERLNRLHEN VVWSMRSNFV
DVPTDCPQRD ERLGWTGDVQ VFGPTAAFLY DVGGFLASWL ADVAVEQLPD GTVPWYVPMI
PAEFWDPPQP GAVWGDVAVL LPAVLHERFG DTGVLRRQYA SARAWVDLVE RLAGPSRLWN
TGVQLGDWLD PAAPPEEPAA ARTDKYLVAT AYFAHSARTL ARIAGVLGEE ADAARYARLA
AEVREAFTRE HVRADGRLSS DAQTAYALAL AFDLLDEPRR ETAGRRLAEL VAQDGNRVAT
GFAGVNLVTD ALTRTGHDAT AFALLTETGC PSWLYQVSMG ATTTWERWDS LLADGTVNPG
HMTSFNHYAL GSIADWVHRT VAGLAPAAPG YRRLLVRPRP GAGLTAASAR HETPYGPASV
AWNRRDGELV VDVDVPLGVT ATVDLPGRPA TEVGAGHHRF AVPDAVPALP GPGAPSALQP
T