Gene Krad_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_0107 
Symbol 
ID5337179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp2211357 
End bp2212874 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content75% 
IMG OID 
Product2-methylcitrate dehydratase 
Protein accessionYP_001359862 
Protein GI152964078 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0149416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.044685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGAGC ACGAGGTCAG GGTCCGCCGC AGCGACGAGG AGTTCCCCCG CGAGGAGGAG 
CTCGCCTGGC AGCTGGCCCG GGTCGCCACC GACGACGTGC CCGTCGACGA CGACGTCGCC
GGGATGGTCG TGAACCGGGT CCTGGACAAC GCCGCGGTGT CCGCCGCGTC GCTGCTGCGC
GCCTCCGTCG TCGCGGCCCG CGCGCAGGCG CTGGCCCACC CGCCCTCGCG CGGGGGCGCC
GGGGCCCGCG TCGCGGGGAC CACCGAGGAC GTCTCGCCGG AGTGGGCGGC GTGGGCGAAC
GGGGTCGCGG TGCGCGAGCT CGACTTCCAC GACACGTTCC TGGCCGCGGA GTACTCCCAC
CCCGGCGACA ACGTCCCCGC GCTGGTCGCC GTCGCCCAGC ACCTCGGGGT GGACGGCGCG
TCGCTGCTGC GCGGGATCGT CGTCGCCTAC GAGGTGCAGG TCGACCTGGT CCGGGCGATC
TCCCTGCACC GGCACAAGAT CGACCACGTC GCCCACCTCG GGCCCTCGGT CGCGGCAGGG
CTGGGGGCGA TGCTGCGGCT GCCCACCGCG GTGGTGCACC AGGCGATCGG GCAGGCCCTG
CACACCACCA CCGCCACCCG GCAGTCGCGC AAGGGCGCGA TCTCGACGTG GAAGGCGTAC
GCGCCGGCCT TCGCGGGGAA GGTCGCGATC GAGGCCGTGG ACCGCGCGGT GCGCGGGCAG
ACCAGCCCGG CGCCGATCTA CGAGGGCGAG GACGGGGTGG TCGCGTGGCT GCTCGACGGC
CCCGACGCGC TCTACCGGGT CCCGCTGCCC GAACCGGGCG AACCGCGTCG CGCGATCCTC
GACACCTACA CCAAGGAGCA CTCCGCGGAG TACCAGGCGC AGGCCGTCAT CGACCTCGCC
CGCCGCCTGC ACCGCGAGCA CCCGGAACTG CGCGACCCCG CGAACGTCGC CTCGATCGTC
CTGCACACCT CCCACCACAC CCACGTCGTC ATCGGCTCCG GTGCGAACGA CCCGCAGAAG
TACGACCCGG CGGCCAGCCG GGAGACCCTC GACCACTCGG TGCCGTACGT CTTCGCCGTG
GCGCTGCAGG ACGGCGGGTG GCACCACGTC GACTCCTACG TCCCGGCCCG CGCCGCCCGC
CCGGACACCG TCGCCCTGTG GCGCAAGGTG TCCACCGTCG AGGACCCGGA GTGGACCGAG
CGCTACCACG CCACCGACCC GGCCCGGAAG GCGTTCGGCG CGCGGGTCGT GGCGACGCTG
ACCGACGGGT CCACCGTCGT CGACGAGATC GCCGTGGCCG ACGCCCACCC GCTGGGCGCC
CGCCCCTTCA CCCGGCCCCA GTACGAGCGC AAGCTCGCCG TCCTGGCCGA GGGGGTCCTG
GCGCCGGAGG AGGTCGAGCG GTTCACGGCC CTCGCCCGCC GGTTGCCGGA ACTGTCCGCG
GGCGAGGTCC GCGACCTCGG GATCGTCGCC CCGCCCGACC TGCTGTCCAC CGTTCCGCTG
CCGCGCGGGC TGTTCTGA
 
Protein sequence
MREHEVRVRR SDEEFPREEE LAWQLARVAT DDVPVDDDVA GMVVNRVLDN AAVSAASLLR 
ASVVAARAQA LAHPPSRGGA GARVAGTTED VSPEWAAWAN GVAVRELDFH DTFLAAEYSH
PGDNVPALVA VAQHLGVDGA SLLRGIVVAY EVQVDLVRAI SLHRHKIDHV AHLGPSVAAG
LGAMLRLPTA VVHQAIGQAL HTTTATRQSR KGAISTWKAY APAFAGKVAI EAVDRAVRGQ
TSPAPIYEGE DGVVAWLLDG PDALYRVPLP EPGEPRRAIL DTYTKEHSAE YQAQAVIDLA
RRLHREHPEL RDPANVASIV LHTSHHTHVV IGSGANDPQK YDPAASRETL DHSVPYVFAV
ALQDGGWHHV DSYVPARAAR PDTVALWRKV STVEDPEWTE RYHATDPARK AFGARVVATL
TDGSTVVDEI AVADAHPLGA RPFTRPQYER KLAVLAEGVL APEEVERFTA LARRLPELSA
GEVRDLGIVA PPDLLSTVPL PRGLF