| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4457 |
|---|
| Symbol | |
|---|
| ID | 5369303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009661 |
|---|
| Strand | + |
|---|
| Start bp | 81931 |
|---|
| End bp | 83199 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640819253 |
|---|
| Product | transposase IS204/IS1001/IS1096/IS1165 family protein |
|---|
| Protein accession | YP_001355475 |
|---|
| Protein GI | 152998554 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3464] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 68 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGATT TACTAAATCT ACCGGGTATT AAACCAGTGG ATATGTATAA AGAGAGCAAG
GCGCTAATCA TTGTAGCCGT GGCCGACGAG GTCTGTGCGC CAATGTGCCC AGATTGCAAA
ATTCCAATGC ACAAGCATGG AACTCGCAAG AACAAGTTCT CTGACACCCC ACTATATATG
GAACCAGTCC GGCTTGAAGT GCAAAGACCG CGTTTTCGCT GTGAAAGCTG CGGAAAAATG
GCTATGCCTG AACTGAGTTT TCTGGATGAT AAGCGTCGAG CAACTAAGCG GTTGGTCGAT
GTTATTCGTC AACAGTGCCT CGGCACCACA TTTAGGGCAT TAGCAGACCA AACTGGCGTC
GCTGTTAATA CAGTAAAAAA TATTGCGCAT GACTTGATTG ATGAGTTAGA ACAAACGGTT
TGTTACGAAA CGCCGGTTAT CATGGGCATT GATGAGGTTA ATTTGGCCGG AGGTTATCGA
TGCGTTATCA CAAACCTTGC GACTAACAAC GTATTTGAAA TGCTGGAACA GCGTACGCAA
GACCACCTGA AACCATTTTT TAAGGAATTA CCTAACCGTG AAAAAGTCGA ATGGGTATGC
ACCGATATGT GGCGACCATT TAAACGGTCT TTTGCTGAAT TTTTGCCAAA CGCAAAGTTG
GTAATTGATA AGTTTCATGT TGTTAAAATG GCATCTGAAG CATTAGAAGA AGAGCGTAAA
AAATATCAGG TACAGCTTAG TAAGGAAGAT AGAATTAATG TCAAAAAATC AATCCGATGG
CTGACGCTTA AGCGACCCGC TAACCTGACT CCTGCTGAAC ATAAGGCTCT TGCTATCGTG
CGTGAGCAAA TACCAGAATT GTCCATTGCT TATGATTTCA AAGAAAGCTT CTTTGCTATC
TATGATGAAC CAGACAAGCA AAAAGCTCAG AACGCATTTG AGGCATGGAA AAATAGTTTA
CCTGACGATG GCATGGAGCC TTTCAAAAAG CTTGTCAAAA CCGTTCACAA CCACTATGAA
GATATTTTTG CTTATTGGGA TGCACCGTTC CCAATAACTA ATGCCTACAC AGAAGGCTTG
AACGGATTGA TCAAGATGTC TAATCGACTT GGGCGTGGCT ATAGCTATGA GATCATTCGC
GCAAAGACAC TATATTCGGC AGAAGCCCGC AAGGTTGGTA GCGGTATCCG TTCTGGTCGT
GGAAAGGTTG AGTATGGGCC ACATATACCT ACGCTTGTTA AGCAGGTTGA AAGTGGTGAA
TTAGATTAA
|
|---|
| Protein sequence | MLDLLNLPGI KPVDMYKESK ALIIVAVADE VCAPMCPDCK IPMHKHGTRK NKFSDTPLYM
EPVRLEVQRP RFRCESCGKM AMPELSFLDD KRRATKRLVD VIRQQCLGTT FRALADQTGV
AVNTVKNIAH DLIDELEQTV CYETPVIMGI DEVNLAGGYR CVITNLATNN VFEMLEQRTQ
DHLKPFFKEL PNREKVEWVC TDMWRPFKRS FAEFLPNAKL VIDKFHVVKM ASEALEEERK
KYQVQLSKED RINVKKSIRW LTLKRPANLT PAEHKALAIV REQIPELSIA YDFKESFFAI
YDEPDKQKAQ NAFEAWKNSL PDDGMEPFKK LVKTVHNHYE DIFAYWDAPF PITNAYTEGL
NGLIKMSNRL GRGYSYEIIR AKTLYSAEAR KVGSGIRSGR GKVEYGPHIP TLVKQVESGE
LD
|
|---|
| |