Gene Shew185_4454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4454 
Symbol 
ID5369319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009661 
Strand
Start bp75500 
End bp77527 
Gene Length2028 bp 
Protein Length675 aa 
Translation table11 
GC content45% 
IMG OID640819250 
ProductN-6 DNA methylase 
Protein accessionYP_001355472 
Protein GI152998551 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.0195788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAT TCTCAGGTTC AGCTGCCTCG CAGGCAGATT TTATTTGGAA AAACGCAGAA 
GACCTTTGGG GTGATTTTAA ACATACCGAT TTCGGTAAGA TTATTTTACC CTTTACCTTG
TTACGTCGAT TGGAGTGCGC TCTTGAATCT ACAAGAGAAG TGGTAAGGGA GGCTTACGAC
AATTTCAAGG ATGCCGAAGT TGAGCTTGAC CCAATTCTAC GCCAAACCGC TGGCTATCCC
TTCTACAACA CCTCTGAGTA TTCGCTTTCA ACGCTTGGCA GTACAAAAAC TCGTCGTAAT
CTCGAAGACT ACATTTCTCT TTTTTCTGAT AATGCCAGAG CAATATTTGA AGAGTTTGAA
TTCGGTAACA CGATAATCCG GCTTGAGAAA GCTGGGTTAC TTTTCACCAT CTGCAAAAAC
TTTGCTGGTA TTGATTTACA CCCTGACACC GTGCCAGACA GAGTGATGAG TAATATCTAT
GAGCATTTGA TCCGCCGTTT TGGTGCTGAA GTCAATGAAG GCGCTGAAGA TTTCATGACC
CCAAGGGATG TCGTGCATTT AGCCACAGCA CTCTTGCTTG ATCCTGATGA TGCACTGTTT
GAGGCAAGCC CTGGCCTTAT TCGCACCCTG TACGATCCTA CTTGCGGGAC AGGCGGATTT
TTAACTGACG CAATGAACCA TGTTGCCGAC TATGGCAACC ATTATAAAAT TCCACCGGTA
CTGGTTCCTC ACGGCCAAGA ACTTGAACCG GAAACTCATG CGGTTTGTGT AGCGGGTATG
CTCATCCGTC GCCTTGAGTC AGATCCAGGT CGAGATCTTT CTAAAAATAT CCTTCAGGGA
AGCACACTTT CTAATGATCA GTTTGCAGGT GATCGTTTCC ACTACTGCTT ATCTAATCCG
CCATTTGGTA AAAAGTGGGA GAAAGATAAA ACTGCTGTGG AACGCGAACA TAAACAAGGT
GAATTAGGTC GCTTTGGCCC TGGTTTGCCG CGTATCAATG ACGGTTCCAT GTTGTTTTTG
ATGCACCTTG CAAGCAAGCT TGAATTGCCA AAAAATGGTG GTGGACGTGC TGCAATCGTC
TTATCCGGCT CGCCGTTATT CAATGGCGGC GCAGGCTCTG GCGAGTCTGA AATTCGTCGT
TGGTTACTCG AAAATGACCT TGTTGAAGCC ATTGTTGCTC TGCCCACAGA TATTTTCTTT
AGAACCAATA TCGCTACCTA CCTTTGGATA TTATCAAACA AGAAAACCGA TAATCGCAAA
GGTAAGGTGC AACTTATCAA TGCCACTGAC CTTTGGACAC CTATCAAGAA TGAAGGTAAC
AAACGCCGCA TTGTGGGTGA TGATCAGCGC CGTCAGATTT TGGATATTTA TGCCGCTGCC
GAAAATGACG CGCTCTCTAA AATGGTAGAT TACCAAGTAT TTGGCTACCG CCGTATTAAA
GTGCTTCGCC CGCTGCGGAT GACGCTTAAG CTTGATGAGC AAGGTTTATC CACGTTAGAA
GCAACGGATA CCTGGCAGAA ACTACCTGTT GAGCATAAAG CATTCTGGCG CGAGGCCATT
AAGCCCCAGT TGGGTGAGAC AAAGGAATAC ATCTGGGCAG AAACCTTTAC CAAAGAAACA
GCAAAAACAC CTGATGCCAA GCTGCTTAAG GTAAAAGGCA ACAAGACCTT TATTACTGCC
TTGATTGCTG CGTTTGGTAA AAACGATCCA GATGCAGAAC CGGTGATCGA TGCACAAGGT
AATATCGTTC CTGACACAGA TTTAACCGAT TACGAAAACG TACCTTATCT GGATTCGATC
CAGGACTACT TTGCCCGCGA AGTGCTGCCG CATGCGCCAG ATGCTTATAT CGACGAAAGC
TTTATCGACG ACAGAGATAA GCAGCTTGGT CGCGTGGGTT ATGAAATCAA CTTCAACCGT
TTCTTTTATC AATATCAACC ACCGCGTAAA CTGCATGATA TCGATGCCGA ATTGAAAGAG
GTTGAAAGCG AGATTGCAGC ACTCTTGGCA GAGGTGGCAA CAGAATGA
 
Protein sequence
MTEFSGSAAS QADFIWKNAE DLWGDFKHTD FGKIILPFTL LRRLECALES TREVVREAYD 
NFKDAEVELD PILRQTAGYP FYNTSEYSLS TLGSTKTRRN LEDYISLFSD NARAIFEEFE
FGNTIIRLEK AGLLFTICKN FAGIDLHPDT VPDRVMSNIY EHLIRRFGAE VNEGAEDFMT
PRDVVHLATA LLLDPDDALF EASPGLIRTL YDPTCGTGGF LTDAMNHVAD YGNHYKIPPV
LVPHGQELEP ETHAVCVAGM LIRRLESDPG RDLSKNILQG STLSNDQFAG DRFHYCLSNP
PFGKKWEKDK TAVEREHKQG ELGRFGPGLP RINDGSMLFL MHLASKLELP KNGGGRAAIV
LSGSPLFNGG AGSGESEIRR WLLENDLVEA IVALPTDIFF RTNIATYLWI LSNKKTDNRK
GKVQLINATD LWTPIKNEGN KRRIVGDDQR RQILDIYAAA ENDALSKMVD YQVFGYRRIK
VLRPLRMTLK LDEQGLSTLE ATDTWQKLPV EHKAFWREAI KPQLGETKEY IWAETFTKET
AKTPDAKLLK VKGNKTFITA LIAAFGKNDP DAEPVIDAQG NIVPDTDLTD YENVPYLDSI
QDYFAREVLP HAPDAYIDES FIDDRDKQLG RVGYEINFNR FFYQYQPPRK LHDIDAELKE
VESEIAALLA EVATE