| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4452 |
|---|
| Symbol | |
|---|
| ID | 5369279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009661 |
|---|
| Strand | + |
|---|
| Start bp | 72912 |
|---|
| End bp | 74009 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640819248 |
|---|
| Product | ParB family protein |
|---|
| Protein accession | YP_001355470 |
|---|
| Protein GI | 152998549 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 0.0140271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAA AACGTGGGGT AATGAGCCCT CTAGGTAATG CAGTTGGTGC CGAAGAAGCA
CAAATAAATG CAGCCAAAGC TAATATTGAG TCTTTAAAAC GCCAAATTAC AACTGAAATA
GAAAAAGTAA GTGAAGATGT TACGTTATCT CTTCAAAATC TATTTGGTCT TGAATCTGTA
GGTAAAAGCT TCTTATGGCA ATTAGCTTCG GGTGCTACCG CTACATTTAC CGAAGCAACG
TTATCATATG AACAAGTTCG CGATAGTACC TATGTGACGT TTGATGTTAA CGGGCGTGAC
CAGGCATTAT TAAATGCAGA TTCTCTACAA GATCTCGATT CATTAGCCTT CCAGCAATTT
TACCCAGCCG TCGCGAGAGA AGTGAATGGT AAACTCGATG TGCTAGATGG TTCTCGACGC
AGAGCTTGGT TTTTACTGCA AAATGGTGAA GTTGATATAT TTCGCATACT GGTAACTAAA
GATGATATTT CACTTTCAGA TGCTAAAGCT CTAGCTAAAC AGCTCCAAAC CGCAAAAGAA
CATAACCTAC GTGAAATTGG ACAACAATGC TTATCTTTGG AAAAAGCGAA TCCTAAGATT
ACACAGGCTC AAGTAGCAGC TCAACTTGGA ATGAGTCAGG CTGGTGTGAG TAAAGCTTTA
AAAGCCGCTA AGGTCGATGA ACGTTTGGTG AAGCTTTTTC CTGTGGCTAA TGACTTGTCA
CACACTGACT ATGCTTTGCT GAATAAAGTT ATGGAAGTAT ATGAATTTGA AGATGAATTA
CTATCATTCA TCAATGATTT GACTAAAAAA GTTGTCATTA TTCAGGCTGA ATATTCAAGG
GAAGAACGTA AATCAGCTAT CACCAAAGCG ATAAAAGCAG AACTTCAGAT TGCTAAGGAT
ATGAAAAATA AAGCACTGGT TAGCGTTACT AATCTTGCGA CATTTGATAG TTCTGGCATT
TATGCAAGAA AGCGTATCAA AGGGCGAAAC TTCGCTTATG AATTTGGACG ATTGTCTCTA
GATGTTCAAC AGCAGTTAGA TGTTGCTATT GCTGATGTTT TGAAAAAAAA TAAATTTAAT
ACAACATCTG ATTTTTAA
|
|---|
| Protein sequence | MAKKRGVMSP LGNAVGAEEA QINAAKANIE SLKRQITTEI EKVSEDVTLS LQNLFGLESV
GKSFLWQLAS GATATFTEAT LSYEQVRDST YVTFDVNGRD QALLNADSLQ DLDSLAFQQF
YPAVAREVNG KLDVLDGSRR RAWFLLQNGE VDIFRILVTK DDISLSDAKA LAKQLQTAKE
HNLREIGQQC LSLEKANPKI TQAQVAAQLG MSQAGVSKAL KAAKVDERLV KLFPVANDLS
HTDYALLNKV MEVYEFEDEL LSFINDLTKK VVIIQAEYSR EERKSAITKA IKAELQIAKD
MKNKALVSVT NLATFDSSGI YARKRIKGRN FAYEFGRLSL DVQQQLDVAI ADVLKKNKFN
TTSDF
|
|---|
| |