| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4445 |
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| Symbol | |
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| ID | 5369287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009661 |
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| Strand | - |
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| Start bp | 66218 |
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| End bp | 67036 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640819241 |
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| Product | Type-F conjugative transfer system secretin TraK |
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| Protein accession | YP_001355463 |
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| Protein GI | 152998542 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02756] type-F conjugative transfer system secretin TraK |
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 0.620331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTG CTAACCCACT TGTTTTCGCA GCCTGCGCGC TTTTTCCTAT GAGCGTGTTA
GCGGCAAATA CGCCCCCAAA ACACTACGGA TTCAATGACA GTGAAACGGT TCCTATTGAG
CTGTCGAGTG TTGATATCAA CCGCTTAGTC GTTGAAGGTG ACAAAATCAC CTCGATTGAT
TGTCCAGAAG GATTTTGCGT TGTCACTGGC ACGAAATCGG ATAAATCCGG TGCAGCGCGC
GTTAACCTCA ATTTGGCCAT GCCATTCACA GCCTATGTAT CAACAGAAAA GGGCAGACAT
TTCGGCTTAT TCATCAGCCC TAAAGCCATT CCTGCCGTGA CCTCTATCTT CACTGCAGAA
CATTATCGCG AAGAACAACC CTCCGTTTTC GATAAGAAAA CCCCGTACCC CACCATGATG
ACCGAGTTCA CCGCGCAAAT GATCCGCTAC CTCGCCACGG GTAAACCAAT TGACGGTTAT
CGTGTGCATG TCGTCAATGA TGACCTTGAA CGCACCACGG TAGACAGTGA GCCTAGAGGC
ACGGAAACAT CTATCGATGA CGCGATGTTT ACTCGCTTAA ATGAGCAACA AATGCCCAAA
CCAGCAGGAC TGACGACAGA ACCTGCTTTC GTGTTCACAG GTAAGCATTT CAACGGCATC
ATTTATCGCG TAACCAATCA CGCAGCACTC CCAGTCACCC TCACCACAGC GCAGTTCTAC
TCGCCAACGA CGCGAGCCGC TGCCTTATCA ACCTATGAAT TGGCACCAAA GCAAACAGGC
CACCTCTTTG TGGTCTCGGG CGGGGAGAGC ATGCAATGA
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| Protein sequence | MKIANPLVFA ACALFPMSVL AANTPPKHYG FNDSETVPIE LSSVDINRLV VEGDKITSID
CPEGFCVVTG TKSDKSGAAR VNLNLAMPFT AYVSTEKGRH FGLFISPKAI PAVTSIFTAE
HYREEQPSVF DKKTPYPTMM TEFTAQMIRY LATGKPIDGY RVHVVNDDLE RTTVDSEPRG
TETSIDDAMF TRLNEQQMPK PAGLTTEPAF VFTGKHFNGI IYRVTNHAAL PVTLTTAQFY
SPTTRAAALS TYELAPKQTG HLFVVSGGES MQ
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