Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4443 |
Symbol | |
ID | 5369251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009661 |
Strand | - |
Start bp | 64219 |
End bp | 64662 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640819239 |
Product | Type IV conjugative transfer system protein TraV |
Protein accession | YP_001355461 |
Protein GI | 152998540 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02747] type IV conjugative transfer system lipoprotein TraV |
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Plasmid Coverage information |
Num covering plasmid clones | 73 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAA ATGCATTACG TAACACCAGT ATTATCGCAC TGGCTTCATG GCTATTAAGT GGCTGTGCGG CGGGGCTGGA TAGTGACTAT TCCTGCGATA AGGTGGGCGG CATCAATGGC TGTACCAATA TGATGGAAGT GAGGCAACTC ACCGACAGTG GTGTGTTCAA TCAGCCACAA GCACAAAGCC CTGCGGTGAC AGCCTTAAGC GGCCAAAGCA CAACTGCACT TCCCAAGCTC GCGAGCCAAC AACAAGACTT TATCCCTTTG CCACGCCGCG ACCGCCACGG TGTACCGCTG CGCACCTCTG AGTCAGTCCA AAAAGTAACC ATCTTCCCCT ACCTCAACGA GCAAGGTGAT TACGTTGATA CCAGCGATGT GTACATCGTG GTCGATAAGA GCCGTTGGAC GGGTAGACCT GCCAAATACA TCAAGCAGGA TTAA
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Protein sequence | MSKNALRNTS IIALASWLLS GCAAGLDSDY SCDKVGGING CTNMMEVRQL TDSGVFNQPQ AQSPAVTALS GQSTTALPKL ASQQQDFIPL PRRDRHGVPL RTSESVQKVT IFPYLNEQGD YVDTSDVYIV VDKSRWTGRP AKYIKQD
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