| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4439 |
|---|
| Symbol | |
|---|
| ID | 5369252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009661 |
|---|
| Strand | - |
|---|
| Start bp | 59553 |
|---|
| End bp | 60566 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640819235 |
|---|
| Product | TraU family protein |
|---|
| Protein accession | YP_001355457 |
|---|
| Protein GI | 152998536 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 81 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACACA TTAAACTCGC GTGGCTTGTA GCCTTATCTT TATTGATGGG TCTAATTCCT
TCACAAGCCA ACGCACAGGC CGCCTGTACG GGCACGTTCG TTAACCCGAT GACCGACATT
TGTTGGTCGT GTATCTTCCC GATGACCATT GGCAGTGTGC CTATTATTCC TGGGAGCCTA
CCCGATACGC GCAACCCCGT ATCACCCATT TCATTTTGTC CCAAACCGCC GCCTATTTTT
ATGCAAATTG GCTTGAATAT CGGCTACTGG GAACCTGATA CCCTCGTTGA TGTGACGCGC
GTCCCTTACT GCATGGTCAA CATGGGCATG AAACTCGACA TGAGTAATTC CCCCCAAATT
GGCGGTCGCG TCACAAGTCG CGATAACGAT GCCAGTGATG GCGCGTTTTA TCATGGGCAC
TGGTACAAAT ACCCTGTGAT CTATTGGCTG CAAATTATGC AAAGCGCAGC CTGTATGGCC
ACGGACAATT TTGATATCGC TTACCTAACA GAGATAGATC CACTGTGGGA TGACGATGAG
TTGTCTTTTA TTCTCAATCC CGAAGCCATT TTATTTGGCA ATATCGTGTC ACAACTCGCC
TGTGCAACCG AAGCCGTGGC CACTTCGACC AACAGTGTGT TGCCCTTTGA TTTTCTGTTT
TGGTGTATGG GCTCACAAGG CAGTGCTTAC CCCCTGACTG GCACCACCAA TTACCGCGAC
ACGCCCATTC AGGCGGGTAC GTTGATTTTA GAGCGCCTGA ACTACAAATT GCATCGCCAA
GGCATCGTAT GGGAATCCCA CGGTGAAGAC GGCGCGATTT GCTATCAAAC GCCGATGCCC
CTCATGCCCA AATCCCGCTA TCGCTATCAA ATGACCAACA CCATACCCGA TGCGCTATGG
GCGCACCCTT ACACCACAAC CACCGTTATC TGGGAAAGTG GCCACGATAA CCCTGTGTCG
GGTGACAACT TTGGCTTTAT CAACTTCAAA AAACGCAATT GCGTGTTTTT GTGA
|
|---|
| Protein sequence | MRHIKLAWLV ALSLLMGLIP SQANAQAACT GTFVNPMTDI CWSCIFPMTI GSVPIIPGSL
PDTRNPVSPI SFCPKPPPIF MQIGLNIGYW EPDTLVDVTR VPYCMVNMGM KLDMSNSPQI
GGRVTSRDND ASDGAFYHGH WYKYPVIYWL QIMQSAACMA TDNFDIAYLT EIDPLWDDDE
LSFILNPEAI LFGNIVSQLA CATEAVATST NSVLPFDFLF WCMGSQGSAY PLTGTTNYRD
TPIQAGTLIL ERLNYKLHRQ GIVWESHGED GAICYQTPMP LMPKSRYRYQ MTNTIPDALW
AHPYTTTTVI WESGHDNPVS GDNFGFINFK KRNCVFL
|
|---|
| |