Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4425 |
Symbol | |
ID | 5369297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009661 |
Strand | + |
Start bp | 38515 |
End bp | 38742 |
Gene Length | 228 bp |
Protein Length | 75 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640819221 |
Product | HicB-related protein |
Protein accession | YP_001355443 |
Protein GI | 152998522 |
COG category | [S] Function unknown |
COG ID | [COG4226] Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.0000112957 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.138894 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCAAA ATGCAATGAC ATTTAAGGGT TATCACGGCT CTGTAGAAAT CAGCCCAGAG GATAATATTC TGTTTGGGCA GGTGTTATTC ATTTCACCGT TGATCAACTA TGAGGCCGAA ACCGCCAAAG AGTTAGAGCA AGCATTTCAA GAGGCGATTA ACGCTTATCT TGCTGATTGT GTTCAACAGG ACATTCCGCC AGAGAAAGCC TTGGAAGGGA TAGCTTAA
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Protein sequence | MMQNAMTFKG YHGSVEISPE DNILFGQVLF ISPLINYEAE TAKELEQAFQ EAINAYLADC VQQDIPPEKA LEGIA
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