Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4417 |
Symbol | |
ID | 5369284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009661 |
Strand | + |
Start bp | 32345 |
End bp | 34225 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640819213 |
Product | nuclease |
Protein accession | YP_001355435 |
Protein GI | 152998514 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0000000000853947 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00344778 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACAAACT CAATTCAAGC GCAAGCAACT CACACTAAAG CCAGCATTTC ACCCGCCAGC CACGAGACTC AAGCAGGCTC TCACAAGCCC GATATCGCTC AAAAATCGGC AACAGCGGCT AACTCTGTGG TGGCATTGGC TTCAACAGCA AAGCCAGTGT TACTGCAATT GCAGATTAAC CAGTTGGTGT TGTCTGAGAA GAACGTGCGT AAAGAAAATG CGTCCAAGGC TGACGATGAA CAGTTGTATG CCTCCATTTT GGCGCATGGC ATTTTACAAA ATCTGATTGT CGAGCCCATG AACGTGGAAG GCTTATATCC TGTGTTGGGC GGTGGCCGTA GACTGAGACA GCTCATTAAA GCGGTCAAAA ATAATAAGCT GAAACCGAAA ACGCTTGTGC CTGTTAAGTT GCTGACAGCC GAAGAAGTGG CCAACTATGC CACCGAGCTA TCAATGACTG AAAACTTCAC GCGCGCCAAG ATGCACCCAG TCGATGAATT TCACGCTTTT GCTGACATGG TGAATCAGGG CGCGAGCATT GCTGATGTTG CGGCGCGGTT TGGCGTAACA GCGAAATTCG TGCAGCAGCG CATGAAGTTA AGCATGGTCG CCCCTGTTGT GCTCGATGCG TACAAAGCGG GGAACGTGTC GCTTGATGTC GTGATGATAT TCACGATTGC CAGTGTCGAA AAACAAGTCG AAGTGTGGGA GCTGGCAGGC GATAGACATT ACAACGAGCA TCAGTTCCGC AACATGCTCA AAGCCGCTGC GGTGAGTGCA GATCACTACC TCGCTAAGTT TGTAGGTCAA GACGAATACG AAAAAGCGGG CGGGGTTGTG ACCTCAGACT TGTTCAGTGA TGAAGTCTAT CTTGATGATA AAGCCCTGCT CGAATCATTA GCGACCGCAA AATTGGAAAT CGAAGCAGCA AAATTAATCG CGCGTGGCTG GAAGTGGACA CAGATAAAGT TAGTTTCTGA GTATGATGAA CTTGCAGGGT TTGGGCTTTT AGATTTAAAA GAGGGTGAGT ATGATCCCGC TGAAATGGCG CTAGCGGGGT GTATGCTCGT GTTAAAAAGT TTTGGTGAGC CTGTCAGTAT CTATATTGGG TTAGTGCATA AGGACGATAA AAAGGCACTG GCACAATTAA AAGCCAGTGT GCAATCAGAC CCACTCAACG TGAACGTGGG TGACGTGAAA AAAATTGAAG ATAAGGATAC TAGCGGTTAT TCCGCTGCGC TTAATGACGA CTTACGGGCT CAGCGTTTGA TTATCACGAA ACATGCGTTA ATGAGTGCGC CAAGCGTTGC GCTTGATACG TTGCATTTCT CTGTCTGTGT AAGCGCGTTC ACTGATTCAC ATTATGGCAG TCGTCCACTG CATATCAGCG TTAACGACAC CACTTGCCAT CCTAAAACGG GAGCGCTCAC GGATAACAAA GCGGTGCAGT TAATCGAGGG TGTAAAAGCC AGCCTAAATT TAGCGTGGGT TGGTCTGCCA ACGGTCGCTG AACGCTTTAA CGCTTTTTGC GCCCTCGATG TAAAAGAGAA AGAAAAGCAG GTGGCTTACG CCACGGCTTC CATGTTCGAG GCGTCAATTG ATAATAGTCA TAAAGCTGTT GAGGCCGTGA TATCCACGCT CGATGTGAAA TGGTCTAACT ACTGGCGACC AACGGCAGAA ACCTTCTTTA AGCGCGTGAG CTTGTCTTGT TTAATTGATA TGGCTCAGCC TGTCATGGGT GAGCAGTGGG CATTACAAGC CGCCGCACTC AAGAAAAAGG ATTTAGCAAA TCAGGTTGAT AGCTTAGTGA ACGGGGAGCG AAAAGGGCTA GATGATGCAC AAAAAGCCTA CTTTGATGCG TTGATGCCCG CTGGATTTTA A
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Protein sequence | MTNSIQAQAT HTKASISPAS HETQAGSHKP DIAQKSATAA NSVVALASTA KPVLLQLQIN QLVLSEKNVR KENASKADDE QLYASILAHG ILQNLIVEPM NVEGLYPVLG GGRRLRQLIK AVKNNKLKPK TLVPVKLLTA EEVANYATEL SMTENFTRAK MHPVDEFHAF ADMVNQGASI ADVAARFGVT AKFVQQRMKL SMVAPVVLDA YKAGNVSLDV VMIFTIASVE KQVEVWELAG DRHYNEHQFR NMLKAAAVSA DHYLAKFVGQ DEYEKAGGVV TSDLFSDEVY LDDKALLESL ATAKLEIEAA KLIARGWKWT QIKLVSEYDE LAGFGLLDLK EGEYDPAEMA LAGCMLVLKS FGEPVSIYIG LVHKDDKKAL AQLKASVQSD PLNVNVGDVK KIEDKDTSGY SAALNDDLRA QRLIITKHAL MSAPSVALDT LHFSVCVSAF TDSHYGSRPL HISVNDTTCH PKTGALTDNK AVQLIEGVKA SLNLAWVGLP TVAERFNAFC ALDVKEKEKQ VAYATASMFE ASIDNSHKAV EAVISTLDVK WSNYWRPTAE TFFKRVSLSC LIDMAQPVMG EQWALQAAAL KKKDLANQVD SLVNGERKGL DDAQKAYFDA LMPAGF
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