Gene Shew185_4413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4413 
Symbol 
ID5369269 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009661 
Strand
Start bp27821 
End bp28980 
Gene Length1160 bp 
Protein Length386 aa 
Translation table11 
GC content45% 
IMG OID640819209 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_001355431 
Protein GI152998510 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.0000737696 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0155639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTGA AGAAATCACA TAAGAGTTAT CCGCAGGCAT TTAAAGATGA AGCCGTCTTG 
ATGGTGCTAG AACAAGGTTA TAGCGTTGCC GATGCGGCAA AGTCTCTTGG AGTTAGCACG
AGCCTGCTTT ACAACTGGAA GGAAAAACAC GAAGCCCTGA AACAAGGTAT CACCTTAGAA
GAGTCTGAGC GTGATGAGCT AAAGAGATTA CGTAAAGAAA ACAAAGAATT ACGCATGGAG
AAAGAAATTC TAAAAAAGGC AAGCGCCTTC TTTGCGAGAG AAATGAAGTA AGATTTCGTT
TCATCAAACA GCAATCTAAC CTGTTTCCTA TAACACTGTT ATGCCGAGTA ATGAGTGTCA
GTAAGTCAGG CTATTACGAT TGGCATAAAC GCCCTGCAAA CGTGATAAGC GTTGAAACAC
TGAAGCTTTA TCGCCTTGTT CGACAGCTAT TTAAGCAAAG TCGAGGCAGC TTAGGGAATC
GTGAAATGGT GAAGAAATTG CGCAAGGAAG GCTACCAGGT TGGTCGCTAT CTCGTTCGTA
AAATTATGCA CCGCCTTCGA CTCAAAGCAA CCCAGCGACG CGCTTACAAG GTGACTACGC
AGCGAAAACA CTCAGATGCT GTGGCTGATA ACCTGCTAAA CATGAACTTT AACCCCGTAT
CGGCTAATGA GGTTTGGGCG GGTGACGTGA CCTATTTAAA GACAGGTGAA GGTTGGATGT
ATTTGGCAGT GGTGATGGAT TTATATTCAC GCCGGATTGT GGGATGGCAC ATAGACAAAC
GCATGACCAC AGATTTGATA TCTAAGGCAT TAATAAAAGC CTACAACCTG CGCCAACCGG
CCAGAGGGTT GGTATTTCAC AGTGACCGAG GCTCGCAATA TACCAGTAAG CAGTTCGGCA
GGTTGCTATC GAGCTATGGT ATCCGAGCCA GCATGGGTGA TGTGGGTGCG TGTTGGGATA
ATGCCGTTGT TGAGCGATTC TTTGGTAGCT TGAAACACGA TTGGATTTTT AAAGTTGCTC
AACCAACAAG GGAGTTTATG AAGCAAGATG TGACGGCTTA CATGAAATAT TACAACTTGG
AGCGACTTCA TTCTGCTAAT GACGATCTGT CACCTGTAGA GTTTGAGAAT TCTCAAGTAA
AAGTGTCCAG TTTGGGTTGA
 
Protein sequence
MSLKKSHKSY PQAFKDEAVL MVLEQGYSVA DAAKSLGVST SLLYNWKEKH EALKQGITLE 
ESERDELKRL RKENKELRME KEILKKGKRL LCERNEVRFR FIKQQSNLFP ITLLCRVMSV
SKSGYYDWHK RPANVISVET LKLYRLVRQL FKQSRGSLGN REMVKKLRKE GYQVGRYLVR
KIMHRLRLKA TQRRAYKVTT QRKHSDAVAD NLLNMNFNPV SANEVWAGDV TYLKTGEGWM
YLAVVMDLYS RRIVGWHIDK RMTTDLISKA LIKAYNLRQP ARGLVFHSDR GSQYTSKQFG
RLLSSYGIRA SMGDVGACWD NAVVERFFGS LKHDWIFKVA QPTREFMKQD VTAYMKYYNL
ERLHSANDDL SPVEFENSQV KVSSLG