Gene Shew185_4408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4408 
Symbol 
ID5369299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009661 
Strand
Start bp23758 
End bp24366 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content43% 
IMG OID640819205 
Productresolvase domain-containing protein 
Protein accessionYP_001355427 
Protein GI152998506 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.000545957 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0701498 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCT ACGGATATTT AAGAGCATCA ACAGCTGAAC AAGACGCCAG TCGAGCTAAA 
GAGCAATTAT CTGACTTTGC CAAACAAATG GATTTAAACA TTGCATGTTG GTTCGAAGAG
AATGAATCGG GCGCCAGCTT AAAGCGACCA GAGTTATTTC GGCTGCTTGA TGTTGCGCAA
CCAGGGGACG TTCTTCTGGT TGAACAAGTA GACCGCATAA GTCGATTGGA TAGCCATGAC
TGGGAAACGC TTAAAAGCCT CATTAATCAA AAACGCATAA AAGTCGTATC GATTGATTTG
CCAACGAGCT ATCAGTTTAT GAAAAACACC GATACATTTA CCGAGCGGAT GATGTCGGCC
CTCAACAGTA TGATGTTAGA TATGCTAGCC GCAGTCGCAC GTAAAGATTA CGAAGATAGA
CGCAGACGAC AAGCCCAAGG CGTTCAGCGG GCAAAGCTAG CCGGTAAGTA TAAAGGCAGA
CCTGAAGATA AAGTGCTGCA TCAAAAGATT GAAGGGTTGC TCATCGATGG TAAAAGTTAC
AACTACATTG TGGATCTATT AGGCTGTTCT AGGCATACCA TTTCAAAAGT AAAAAAACGA
TTAACTTAG
 
Protein sequence
MRIYGYLRAS TAEQDASRAK EQLSDFAKQM DLNIACWFEE NESGASLKRP ELFRLLDVAQ 
PGDVLLVEQV DRISRLDSHD WETLKSLINQ KRIKVVSIDL PTSYQFMKNT DTFTERMMSA
LNSMMLDMLA AVARKDYEDR RRRQAQGVQR AKLAGKYKGR PEDKVLHQKI EGLLIDGKSY
NYIVDLLGCS RHTISKVKKR LT