Gene Shew185_4407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4407 
Symbol 
ID5369320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009661 
Strand
Start bp22661 
End bp23524 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content43% 
IMG OID640819204 
Producthypothetical protein 
Protein accessionYP_001355426 
Protein GI152998505 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.000000325165 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0739 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAA CACGAGTATT ATGCGCTACA GCTATGCTTT TCCCACTTTT GGTTAATGCA 
GGGATGACAC AAGATGCAAG TCATAGCGTT TCAGATAAAG TAATAGAAAA TCAAAGAACT
TCATTGGCTT CTAATACTTT AGGTAAAGGT TATGGTCCTC AGTCACCAAG AGATATAGAT
AGTATTCAAG GCAATAACAA GCGCATATTT TCTGAAGCTC CTGACTACAT GGAAATGAAC
TTATGCAATA TACATTTCCA TAAGAATGCC GAGCATAAAG GCGGGGAGTT CACCAAATAT
GCCGGCAATG GTGATGGCCA CGGCTACCAG ACCGGTTATC AATATACTGG TAAGTTATCT
AAAAAAGAGT TAAGCCCCCT TAAACATGAA GTCGGTGCGA GTCAACACGG TAGCCTGCAT
CCAGGGGATA CCATTGAAGT GCATTATGTC CATTCAACCG CTAAAGTGAG CCCAGGTCCG
ACTCTGGGAG CTTGTCTCAG TAAAGCGAAT AGCAACCCTC AGCTCCGAGT AGAAACTCAG
GTATTTGTGC TAGTAAATGA CGCTAAAGCA ATGAGTTTTA TGGAACTGAC AAAGTTAGGC
ATTAAAAACG GATTTAACCA GGCCCTAAAT ATTCCAAACA ATACTGGCGA GCCAGTGGAG
TATGAAGGTT CAACCACCGG TCCAGGTTAT AACGAGATCG CTTCACCACT ACAGGTGAGC
TGGAGCGTAC GTCCAAAAGT CATGAAGGTA GACATTAACA GCGTAGGTCA ATGGTTAGAG
GGCAATGTCT TCGATGAAGA TCATGCCCAC GGAGTTAGAA ACCTAGTAAT TAATCCAGAT
CTACTCTCTG CTGAAAGTGA CTAG
 
Protein sequence
MNKTRVLCAT AMLFPLLVNA GMTQDASHSV SDKVIENQRT SLASNTLGKG YGPQSPRDID 
SIQGNNKRIF SEAPDYMEMN LCNIHFHKNA EHKGGEFTKY AGNGDGHGYQ TGYQYTGKLS
KKELSPLKHE VGASQHGSLH PGDTIEVHYV HSTAKVSPGP TLGACLSKAN SNPQLRVETQ
VFVLVNDAKA MSFMELTKLG IKNGFNQALN IPNNTGEPVE YEGSTTGPGY NEIASPLQVS
WSVRPKVMKV DINSVGQWLE GNVFDEDHAH GVRNLVINPD LLSAESD