Gene Shew185_4393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4393 
Symbol 
ID5369246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009661 
Strand
Start bp8558 
End bp10060 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content30% 
IMG OID640819192 
Producthypothetical protein 
Protein accessionYP_001355414 
Protein GI152998493 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones76 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAT TGTTCTCTAC TCTGACTACA TCGACTTACG ATTGGAGTAT AGATTTTAAA 
ACAAAGAAGG ATTTTATAGC GGTAGCTAAC GAAATCGGCT ACACCTTCAT ATCTTCTAAA
ACGACTAATG AAGTATCGGA GTTTATAAAG AGAAAAGTAG TATCGTTATT AACTTCAAAC
GAATGTCCTT ACGAAGATTA CATCACGGTT TTCAACCAAT TCTCGTATGA TTTCTATTGT
AACAATAAAA ATCCCAATGA ATTCAGATTT CTTGCTTACC TCAGATTCTT TTTAAATTTT
CTAGATGGGT ACACCATCAA CGAACAAAAA TGGATAGAGG CACATAAACT TATACAAAAT
TACATTTATA TGGCTAATCA TAATCATCCA TATTTATCTT TAAATGAAAA AAACAAAATC
GTATCAGAAG CAGTTAAAAG ATTCAGACAA AAAGGAATCA AGGTTGATGT AATCGAAGGT
AAAATTCACT TAAGCGATGA ACAATTCAAC AATGTTCTGC AAAGAATTGA TTTTAGAGCA
AAAAAACTGG GTGATAAACT TTATCAGGAT ATTCTTGCAA GAATTAAATC ATGCTATAGA
AAAAAACATG ATAGATTTTA CTTGAGGAAA GAGTTACATC CAACAAACTC TCAACCAGAG
CCAAACATTC CTTTTGGTTA CCTTTATAAT CTGTCCATAA AAAATTTGAA TACAGTAAAG
AATCATCAAG CAAAAAAGCA AATATCAGAG ATTATTGAGT TATCGAAAGA TCTAATGACA
ATATTAGAGC TACAATGGTT AAATCCATAC GAAAGCTTGC TTTCAGGCCA AGATATAATG
CCTTATTTGC GAAAGAACTT ATTGCACGAT GAACTATTTA CTGTTCATCA GTATAGTAAT
AGTAATGCCA GGAAAATAAT CAATGGCATG TTCAATAAAA ATCATAATGC CAAAATACCC
AAAGACATAG ATTTAAGCAT TTGCATTGAT ATTTTTGACA TAGTAAATAC AACGTCGAGC
ATTGATATAC AGTCCATAGA AAAAGCAGAA TTATATTCTC ACTTACTAGG AAGATATACA
GAAAGTGAGA TACAAAGCGC ATTGAATGAA CTGTGTATAG AAGAAAGTCA AGTGAATAAA
GACTATCTAA ATCCTTTCGA TATGAACGCG ATAAACTACT ATGAAAAACC ATTCATTAAA
AATAATGATA AGATTATTTA TTTAAACTCA TATTTTCATA ACGATGGATT TGTGTGGTTT
TTGAGGTCTA AGCTGAAACA TGAGTGTGCT AAAATAGGAA TAGTAGGAAA AAAATTTAAC
GACTTACGTG GTGATATGTC AGAAGAATTT ATAAAAAACC TATTAAATGC AAGAAAAATA
TCTCACAAAT CTGGATTAAA ATACAAAGTT AAAGGAAAAA TTTTTCAAGA TATTAGCTCA
AATTCAAAAG ATGGTGAATG TGACTTTTGT ACTGGTCAAC CCAAACTGGA CACTTTTACT
TGA
 
Protein sequence
MNQLFSTLTT STYDWSIDFK TKKDFIAVAN EIGYTFISSK TTNEVSEFIK RKVVSLLTSN 
ECPYEDYITV FNQFSYDFYC NNKNPNEFRF LAYLRFFLNF LDGYTINEQK WIEAHKLIQN
YIYMANHNHP YLSLNEKNKI VSEAVKRFRQ KGIKVDVIEG KIHLSDEQFN NVLQRIDFRA
KKLGDKLYQD ILARIKSCYR KKHDRFYLRK ELHPTNSQPE PNIPFGYLYN LSIKNLNTVK
NHQAKKQISE IIELSKDLMT ILELQWLNPY ESLLSGQDIM PYLRKNLLHD ELFTVHQYSN
SNARKIINGM FNKNHNAKIP KDIDLSICID IFDIVNTTSS IDIQSIEKAE LYSHLLGRYT
ESEIQSALNE LCIEESQVNK DYLNPFDMNA INYYEKPFIK NNDKIIYLNS YFHNDGFVWF
LRSKLKHECA KIGIVGKKFN DLRGDMSEEF IKNLLNARKI SHKSGLKYKV KGKIFQDISS
NSKDGECDFC TGQPKLDTFT