Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4385 |
Symbol | |
ID | 5369254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009661 |
Strand | + |
Start bp | 2214 |
End bp | 2942 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640819185 |
Product | hypothetical protein |
Protein accession | YP_001355407 |
Protein GI | 152998486 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 82 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTTTG GTATTTCTCA AAATGGTAGT GAGGATTTAC TTGAATACCC CATTAATCAA GTAAAGGGGA TTTTATACCG TGAAGCAAGT AACGTAAGAC ATTATGAGAA CTTAAAATTT CTACTTAATT GTTATAAAAC GGAAGAAGAA GCAGAGAGAG CTTTAAGTTT GTTCTATCAA GGTAAGTTGC CACCTTTGCC ACCAATTAAC CTTAATTTAG GTGGTTTTAG TATGAGTGAC CCATATCTTG AGGCGTGTGG TACTACGAAC TTTGATGTGT TTAGTATATA TATGATGAAT CTATGTTCAC TCTTAGGTGT TCAAAAGTTC TTGAACCATG GGAATGAATA TTCAGATATC AAAAAATATC CGCAAAAAGT GAAAGAATTA ATATATAGCG AGAGAAAAGA GTGGTTGCCT AAATCGGTTA AGCTTTGGAG AAATAAAGTT GCTGCTCATT ATGCTGCGGC AGATCCAAAA AAAGAAGATA ATATACTTAC TTTGATGGCT TCATTATCAG TCATACCTAA TTATTCTTTT CCTAGGTACA CGGTGTCTTC AATGAATATT GTTATTAATG GCGAGTCATC TCAGCTTCAA GAGTGGTCGG TAACTAGAGT TTATGATGAA TTGGTAGATA AATTAGCTCT ACGACCATTA GTACCATTGA TAAACACTTT ATTAATTGGT CCTAATGGGG AAAAAGATCC ATTGCTTACT CATTCATAA
|
Protein sequence | MKFGISQNGS EDLLEYPINQ VKGILYREAS NVRHYENLKF LLNCYKTEEE AERALSLFYQ GKLPPLPPIN LNLGGFSMSD PYLEACGTTN FDVFSIYMMN LCSLLGVQKF LNHGNEYSDI KKYPQKVKEL IYSERKEWLP KSVKLWRNKV AAHYAAADPK KEDNILTLMA SLSVIPNYSF PRYTVSSMNI VINGESSQLQ EWSVTRVYDE LVDKLALRPL VPLINTLLIG PNGEKDPLLT HS
|
| |