| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_6346 |
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| Symbol | |
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| ID | 5359252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 6561757 |
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| End bp | 6563781 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640815390 |
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| Product | hypothetical protein |
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| Protein accession | YP_001351657 |
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| Protein GI | 152987031 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATC ATCAGAACGG GCTGCACAAC GAGGCGGAAA GCTGGCCGCG CACGCTGTTC
GCCGTGGCCC TGGCCTTTTC CGTGTTCCAG GTCGTCACCG CGGCCTTTCC CCTGATTTCG
ACCCAGGTCC TGCGGGCGAT GCACGTCGGC CTGCTGTTGC TGGTGGTCTA CCTGAGCTAT
CCGCTTGCCG GCGTACGGCG CCCCTGGCAA CCGCTGGCCT GGCTGCTGGG CTTGGCCGGA
CTGGGTACGG CGATCTACCA GTGGGTATTC GAGGCCGACC TGATCCAGCG CTCCGGAGAG
CTGACCCAGG CCGACATGGT CGTCGGCGTG GTGCTGATCG TGCTGGTCTT CGAGGCGGCG
CGACGGGTGA TGGGCATCGC CTTGCCGATC ATCTGCGCGC TGTTCCTGGC CTACGGTCTG
TTCGGCGAAC ACCTGCCGGG CGACCTGGCC CATCGCGGCT ACGGTTTCGA CCAGATCGTC
AACCAGCTGT CTTTCGGCAC CGAGGGGCTC TACGGCACGC CAACCTACGT GTCGGCCACC
TATATCTACC TGTTCATCCT GTTCGGCGCC TTTCTCGAAC AGGCGGGGAT GATTCGCCTG
TTCACCGATT TCGCCATGGG CCTGTTCGGC CATCGGGTCG GCGGGCCGGC CAAGGTCTCG
GTGTTTTCCT CGGCGCTGAT GGGCACCATC ACCGGCTCCG GGGTGGCCAA CGTGGTCACC
ACCGGACAGT TCACCATCCC GTTGATGAAA CGCTTCGGCT ACAAGCCGGC GTTCGCCGGC
GGCGTCGAGG CGACCGCGAG CATGGGCAGC CAACTGATGC CGCCGGTGAT GGGGGCGGTG
GCGTTCATCA TGGCCGAGAC CATCAACGTG CCCTACGTGG AGATCGCCAA GGCGGCGCTG
ATCCCTGCGC TCCTGTATTT CGGCTCGGTG TACTGGATGG TCCACCTGGA GGCCCGCCGG
GCCGACCTCA AGGGCCTGCC GCGCGAGCAG TGCCCGAGCG CCTGGGGCGC CGTGCGCGAA
CGCTGGTTCC TGCTGATTCC GTTGCTGGTA CTGATCGCGT TGCTGTTCTC CGGACGCACG
CCGCTGTTCT CCGGAACCAT CGGCCTGGCG CTGACCGCCA TCGTCATCCT CGGTTCGGCG
ATCATCCTGC GGGTGTCCTC GCTCGGCCTG CGCATCGCCT TCTGGGTCGC GCTGGGGTTG
CTCTGCGCCG GCTTCTTCCG CCTCGGCATC GGGGTGATCT TCGTCGTGAT AGCGGCCCTG
GCCCTGGTCT GCTGGTTCGT CCGCGGGGGC CGGGAAACCC TGCGCATCTG CGTCCGCGCC
CTCGCCGAGG GCGCGCGGCA TGCGATCCCG GTGGGCATCG CGTGCACCCT GGTGGGAGTC
ATCATCGGGG TGATCTCGCT GACCGGCATC GCCACCACCT TCGCCAGCTA CGTGCTCGAC
CTGGGGCGGG AAAACCTGCT GCTGTCGCTG GTCCTGACCA TGGTCACCTG CCTGGTCCTG
GGAATGGGCA TTCCGACCAT CCCCAACTAC ATCATCACCA GCTCCATTGC CGCGCCGGCG
CTGCTGGAAC TGGGGGTGCC GCTGATCGTC TCGCACATGT TCGTCTTCTA CTTCGGCATC
CTCGCCGACC TCACCCCGCC GGTGGCGCTG GCCTGTTTCG CGGCGGCGCC GATCGCCAAG
GAGAGGGGAT TGAAGATCAG CTTCTGGGCG GTGCGCATCG CCCTGGCGGG GTTCGTGGTG
CCGTTCATGG CGGTCTATTC CCCGGCGTTG ATGCTGCAGG AAGGCGGTTG GGGGGCGACG
CTCTACGTCG CCTGCAAGGC GGTGCTGGCC ATCGGTCTGT GGGGGATGGC TTCCATTGGC
TACCTGCAGG GTCCGCTGGC CTGGTGGGAA CGCCTGCTGG CGTTCGCCGC GGGGGCGAGC
CTGGTCCTGG CCTTGCCGAT CAGCGACGAA CTGGGCTTCG TCCTCGGCGG GCTGGTGATC
GGCTGGCATC TCTGGCGCCA GCGCGCGGGC GAGGCGGTGG CGTGA
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| Protein sequence | MSDHQNGLHN EAESWPRTLF AVALAFSVFQ VVTAAFPLIS TQVLRAMHVG LLLLVVYLSY
PLAGVRRPWQ PLAWLLGLAG LGTAIYQWVF EADLIQRSGE LTQADMVVGV VLIVLVFEAA
RRVMGIALPI ICALFLAYGL FGEHLPGDLA HRGYGFDQIV NQLSFGTEGL YGTPTYVSAT
YIYLFILFGA FLEQAGMIRL FTDFAMGLFG HRVGGPAKVS VFSSALMGTI TGSGVANVVT
TGQFTIPLMK RFGYKPAFAG GVEATASMGS QLMPPVMGAV AFIMAETINV PYVEIAKAAL
IPALLYFGSV YWMVHLEARR ADLKGLPREQ CPSAWGAVRE RWFLLIPLLV LIALLFSGRT
PLFSGTIGLA LTAIVILGSA IILRVSSLGL RIAFWVALGL LCAGFFRLGI GVIFVVIAAL
ALVCWFVRGG RETLRICVRA LAEGARHAIP VGIACTLVGV IIGVISLTGI ATTFASYVLD
LGRENLLLSL VLTMVTCLVL GMGIPTIPNY IITSSIAAPA LLELGVPLIV SHMFVFYFGI
LADLTPPVAL ACFAAAPIAK ERGLKISFWA VRIALAGFVV PFMAVYSPAL MLQEGGWGAT
LYVACKAVLA IGLWGMASIG YLQGPLAWWE RLLAFAAGAS LVLALPISDE LGFVLGGLVI
GWHLWRQRAG EAVA
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