Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_6339 |
Symbol | amiA |
ID | 5358727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 6555869 |
End bp | 6557062 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640815384 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_001351651 |
Protein GI | 152987900 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGCC GCCGCCTGCT GCAAACCCTG CTCGCCAGCC TGGCCATCCA GCCCTTCCTG GGTGCCGGGG CCACTCTGCG CATCGGTCAG GCCCGGGCCT GGAACTCCGC CGAAAGCTGG CGCCTGGTGC TCGACCTGGA CGGCCCGCCG CGCTACCGGA CCTTTTCCCT GCAGGCTCCG GAACGCCTGA TCCTCGACCT GCCCGACACG CAATTGCAGG CGGTGCTTTC CGCGCTGCCC CTCGACGGCC CCGTGCGCGG CATCCGCAGC GGCCAACTGG CCGGTGGCGG GACCCGCATC GTCCTCGACC TGCGCCAGGC GGTACGGCCG CACAGCTTCG CCCTGGCGCC GCAGGCGGGC AAGGGGCATC GCCTGGTCCT GGATCTTTAT CCACAGGCGC TGGCCACGCC GCCCGAGCAC CTGCTGGCGC TGGCCAGCCC GGCACCGCCG AAGGGCCGCG ACATCCTCGT GGTGGTCGAC GCCGGCCATG GAGGCAAGGA CCCCGGCGCG CTCGGCAGCC AGGGCGAGCG GGAGAAGGAC GTGGCCCTGG CCATCGCCCG CCTGCTGGCA CGGCGGATCG ACCGGGAGAA AGGCTTCAAG GCGCGCCTGG TGCGCAACGA CGATGTGTTC ATCCCGCTGC GCAAGCGACC GGAAGTGGCG CGGCGCTACA ACGCCGACAT GTTCGTCTCG GTGCACGCCG ACGCGGCGCC GCGCCTGACC GCATCCGGGG CCTCGGTGTT CGCCCTTTCC GAGCATGGCG CCAGTTCGAC CATGGCGCGC TGGATGGCCG ACCGCGAGAA CGGCGCGGAT CTGATCGGCA GCAGCGGCAA CCTGCCGTTG CAGGGTCGGG ACAAGGTACT CGCCGGAGTG ATCCTCGACA TGGCCCTGAG TTCGACCATC GCCAGCAGCC TGGACCTCGG CCATAGCGTG CTCGGCCAGT TGTCGGACGT CACCGCGTTG CACCAGAAGC GCGTCGAGCA GGCCGGTTTC GCCGTGCTCA AGTCGCCGGA CATCCCCTCG ATCCTGGTCG AGACCGGATT CATCTCGAAT CGCGGTGACT GCCGCCGGCT GATGGACGCG CGCCACCGCC AGCGCCTGGC CGAGGCGATC TTCGCCGGCG TCCAGGGCTA CTTCCGCCAG CGACCGCCCG CTGGCAGCTA CCTGGCGACG ATCACGGCGC GGGAGACCGG CTAG
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Protein sequence | MKRRRLLQTL LASLAIQPFL GAGATLRIGQ ARAWNSAESW RLVLDLDGPP RYRTFSLQAP ERLILDLPDT QLQAVLSALP LDGPVRGIRS GQLAGGGTRI VLDLRQAVRP HSFALAPQAG KGHRLVLDLY PQALATPPEH LLALASPAPP KGRDILVVVD AGHGGKDPGA LGSQGEREKD VALAIARLLA RRIDREKGFK ARLVRNDDVF IPLRKRPEVA RRYNADMFVS VHADAAPRLT ASGASVFALS EHGASSTMAR WMADRENGAD LIGSSGNLPL QGRDKVLAGV ILDMALSSTI ASSLDLGHSV LGQLSDVTAL HQKRVEQAGF AVLKSPDIPS ILVETGFISN RGDCRRLMDA RHRQRLAEAI FAGVQGYFRQ RPPAGSYLAT ITARETG
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