| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_6312 |
|---|
| Symbol | |
|---|
| ID | 5356150 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 6527726 |
|---|
| End bp | 6528796 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640815356 |
|---|
| Product | surface protein |
|---|
| Protein accession | YP_001351623 |
|---|
| Protein GI | 152989054 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport
[W] Extracellular structures |
|---|
| COG ID | [COG5295] Autotransporter adhesin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTCCA TGAATATGAA CGTTCCATTC GTGAAAGAAC GGAGCGAGGG TATTGTTCGC
TCTTCGAAAA ACAGGAATTC GCGTTATCTG CTGCTGTCTT TTTCCCTTAC GGCGCTTTCA
TCCATGTCCG GTGTCGCTTT CGCCGATGAG ACCGGGTATA CGACCAATGA CGAACTGCGG
TCCGTCGAGA GCAGCCTGAA CAATCGCCTC GATCGCGCTT CCACGACGCT CGACAACAAG
ATCTCCCAAG TCGCCAGCGA TGTCGCCAGG GTTGACAGCA AGGTCGACGC CAGCGAAAGA
CGCCTGCAGG AAAATATCGA TGGCAACAAG GCGGACATCG AGCAGAAGGT GGTCGATAGC
GAGACACGCC TGCAGAAGAA CATCGACGAC AACGTGAACC AGTTGAACGG CCGCATCGAT
ACGGTCAGCG ATCGCGCCAG CGATCTCGAG AACGGCAGAA GCGGGATGGT CCAGGTGAAT
ACACCCGCCC GCGGACCGGT CCCCGGTCCC AAGGCGAGCG GCGCCAATTC GATGGCGGCG
GGCTCCGCGG CCGAGGCTTC TGGCAACGAC AGCACCGCGC TGGGCAACAA TGCGAAGGCG
ACGGCGAACA ACAGCATCGC CCTCGGCGAC AGCTCGGTCG CCGATCGCGC GAACTCGCTG
TCGGTCGGTA GCCGTGGGCA TGAGCGGCAG ATCACCAACG TCGCCGACGC CACGCAGGGC
ACCGACGCGG TGAACCTGAG GCAGATGAAC GAAGGCCTGC GGGTGACCGA GGAGAATGCC
CGGCACTACA CCGACCAGCG CTTCAACCGC CTGCACAAGA AGATCGAGGA CCTCGACGAC
GACCTGAGCG CGGGTATCGC CGGCGCCATG GCGATGGCCG CGCTGCCACC GCCCTACCAG
GCCGGCGGTA CCTCCACCGG GATTGGCGCG GCCACCTATC GGGGCCAGTC CGCGCTGGCC
TTCGGCCTGT CGTCGATCAG CAAGGACGGC AAGTGGAGCA CCCGGCTCAG CGGCAACATG
AATACCGCTG GCGATGCTGG CGCCGCGGTG GGCGTGGGTT ACAACTGGTA A
|
|---|
| Protein sequence | MFSMNMNVPF VKERSEGIVR SSKNRNSRYL LLSFSLTALS SMSGVAFADE TGYTTNDELR
SVESSLNNRL DRASTTLDNK ISQVASDVAR VDSKVDASER RLQENIDGNK ADIEQKVVDS
ETRLQKNIDD NVNQLNGRID TVSDRASDLE NGRSGMVQVN TPARGPVPGP KASGANSMAA
GSAAEASGND STALGNNAKA TANNSIALGD SSVADRANSL SVGSRGHERQ ITNVADATQG
TDAVNLRQMN EGLRVTEENA RHYTDQRFNR LHKKIEDLDD DLSAGIAGAM AMAALPPPYQ
AGGTSTGIGA ATYRGQSALA FGLSSISKDG KWSTRLSGNM NTAGDAGAAV GVGYNW
|
|---|
| |