Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_6306 |
Symbol | |
ID | 5358896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 6521674 |
End bp | 6522456 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640815350 |
Product | putative TonB-dependent receptor |
Protein accession | YP_001351617 |
Protein GI | 152984025 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC TGCTTGCTGC TTTCTCCGCT GTCGCGGCGC TCGGCCTCGG CACCGCCCAG GCCGCCGAGA CCCTCACCGT CGCCGCGACC CCGGTGCCGC ACGCGGAGAT CCTCGACGTG GTCAAGCCCC TGCTGGCCAA GGAAGGGGTG GAACTGAAGA TCAAGGAATT CACCGACTAC GTGCAGCCGA ACGTGCAGGT CTCGGAAAAG CGCCTGGACG CCAACTTCTT CCAGCACCAG CCGTACCTCG ACGAATTCAA CAAGGCCAAG GGCACCGACC TGGTCGCCGT CACCGGCGTG CACATCGAGC CGCTGGGCGC CTACTCGAGC AAGTACAAGA AACTCGACGA ACTGCCTTCC GGCGCCACCG TGGTGATCCC CAACGACGCC ACCAACGGCG GCCGCGCCCT GCTCCTGCTG GACAAGGCCG GGGTGATCAA GCTCAAGGAC AACAAGAGCA TCACCGCCAC GCCGAAGGAC ATCGTCGACA ATCCGAAGAG CATCAAGATC CGCGAACTGG AAGCCGCGAC CCTGCCGCGC GTGCTGACCC AGGTCGACCT GGCGCTGATC AACACCAACT ACGCCCTGGA AGCCAAGCTG AACCCGACCA AGGACGCACT GGCCATCGAG GGCAGCGATT CGCCCTACGT GAACATCCTG GTGGCGCGCC CGGACAACAA GGACAGCGCC GCCATGCAGA AGCTGGCCAA GGCCCTGCAC AGCGCCGAGG TGAAGCAATT CATCCAGGAG AAGTACAAAG GTGCGGTGGT GCCGGCCTTC TGA
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Protein sequence | MKKLLAAFSA VAALGLGTAQ AAETLTVAAT PVPHAEILDV VKPLLAKEGV ELKIKEFTDY VQPNVQVSEK RLDANFFQHQ PYLDEFNKAK GTDLVAVTGV HIEPLGAYSS KYKKLDELPS GATVVIPNDA TNGGRALLLL DKAGVIKLKD NKSITATPKD IVDNPKSIKI RELEAATLPR VLTQVDLALI NTNYALEAKL NPTKDALAIE GSDSPYVNIL VARPDNKDSA AMQKLAKALH SAEVKQFIQE KYKGAVVPAF
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