Gene PSPA7_6286 details

Gene Information

• Locus tag: PSPA7_6286
• ID: 5358583
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: -
• Start bp: 6502236
• End bp: 6504242
• Gene Length: 2007 bp
• Protein Length: 668 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640815330
• Product: GGDEF domain-containing protein
• Protein accession: YP_001351597
• Protein GI: 152985511
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2199] FOG: GGDEF domain
• TIGRFAM ID: [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCGCG ACGACGCCCA GCGCTGGAAA GACAAGTACC TGGAGAACAT CGAGCAGCAG 
GAGCGCCTGC AGCGCCGCTG GGATGCGCGC ATCGACCTGC TGCGTCGCGG CCTGGTGCGC 
AGCAGCCTGG CGGCCGAAGG CAGCGACAAG GCGGTCGACC TGTGCATGAA GGAGCTGCGC 
GAGATCATCC GCCGCGACGA CATGGACGCC GGCCTGGCCG GCCTGATTCC CCGCCTGGAG 
AAGGCCGTGC TCGACTCCGA GCAACGTCGC CAGCAACGCA CCCAGCAGAA CATCGACGCC 
CTCGGCGAGC TTGCCCAGCA ACTGCTGGCC CTCGACCTGC CGCGGGAGCT GCGCAAGCCG 
CTCAAGCAGT TCGCCCGCGA TATCGAGGAG CGTGCCTGGC AGTCGCGCGA GATACCCATC 
CTGCTCGGCG AACTGAGCCG GTTGCAGCGC CAGGTCCTGG CCGAGCGCAA GGGCGGCGAC 
GGCGACGACA GCCGGCCGAG TCTGCTGCAG CGCCTGTTCG GCGGCAAGGA GGCGGAAACC 
GCCGTGGCGC GGGCGAACCC AGCGCTACCC ATGGCGTCGG CGGTCGCGCC AACCACCGGG 
CCCGCGCCTG TCGCTCAGCC TTTGCCGGTC GGCGCCGGTA GCCCGCGCGG CGAGGTGGAG 
GCCAGCGTCC CGGCAGGGTT ATCCACAGCT CCGGAGAGCG TCGCCGCGGC GCCTCCGGCG 
CGACGTGGCG CGCTGGCCGC GCGCGGCGAG TCGAACCAGA TCCGGCTGGA AGAGCCGCGG 
CCGATCTGGC TGGACAGCCT GCCCCTGCCA GGGGGCCTGG TTTTCCGCGA AACGCCCGGG 
GAGCCCTCGG TGGAGCAGGA GCTGGACATC GAGCCGGAAG AGCCGGGCGA GCCTGTGGAC 
AACCTCGCCG AGGCGACGGC CGACGAGACC TACGCGCTGC CCCCGCCGAT GCCCGAACCC 
GGCTACAGCG CGGTGGCGCC GCATATCGAG GCGAGCCTGC TGCGCCTGCT CGACGGCCTG 
TCCCTGCCGA GCAGCCACCA GCCCCAGGCC GAGGCGCTGC GGGTACGCAT AGACGGCAGC 
CTGAACTGGT ACGAACTGGT GCCGGTGCTG GACGACCTGG CGGTGCTGGT GCTGTCCCTG 
GCCGACAGCG GCCAGCGCGA CTTCGAGGAA TACCTGCGGC AGCTCAACGA GCGCCTGGAA 
AGCTTCCTTG GCCACCTGGG CGATGCCCAC GCCGGCTACA CCGGCGTGCT GGACAACGCG 
CGCGGCTTCG ACCAGACACT GCGCGAGCAG GTCAGCGGCC TCCAGGCCAG CGTGCAGCAG 
GCGACCGACC TGGACAGCCT CAAGCTGGCG GTGGACAGCC GGCTCAACGG CTTGCTCGCC 
TCCATGGACG AACACCAGCG CGAACAGGCC GAACACGAGC AGGAAGTCTC CGGCCGCCTG 
CAGGCGCTGA TGGAACGGGT CAACAGCATG GAGCAGGATG CCAAGGCATT CCACACCCAC 
CTGGAGGACC AGCGACAGAA GGCCCTGACC GACCCGCTGA CCGGCCTGCC CAACCGTGCC 
GCGCTCAGCG AGCGCCTGGA GCAGGAAGTG GCGCGCCGGC GCCGGGACGG CGGCGAGCTG 
CTGCTGGCGG TGCTGGACAT CGACCACTTC AAGCGGATCA ACGATGATTT TGGCCACCTG 
GCCGGTGACA AGGTGTTGAA GATCATCGCC GGCGAGTTGC GCAAACGGTT GCGCCAGGCC 
GATTTCATCG CCCGCTTCGG TGGCGAGGAG TTCGTCGTCC TGCTTCCGGC CACGCCGCTG 
GACGCCGGCC GGCAATTGCT CGAGCGGCTG CGCGCGGCGA TCGCCGCCTG CCCCTTCCAC 
TTCAAGGGCG AGCCCCTGAG CATCACCTGT TCCGCGGGGA TAACCGCCTT CGTCGGCAAC 
GAGGCTGGCG AGGCGGCGTT CGAACGTGCC GACCAGGCGC TGTATCGTGC CAAGCGCGCC 
GGCAGGGACC GCCTGGAAGT CGCCTGA 

 

Protein sequence

MSRDDAQRWK DKYLENIEQQ ERLQRRWDAR IDLLRRGLVR SSLAAEGSDK AVDLCMKELR 
EIIRRDDMDA GLAGLIPRLE KAVLDSEQRR QQRTQQNIDA LGELAQQLLA LDLPRELRKP 
LKQFARDIEE RAWQSREIPI LLGELSRLQR QVLAERKGGD GDDSRPSLLQ RLFGGKEAET 
AVARANPALP MASAVAPTTG PAPVAQPLPV GAGSPRGEVE ASVPAGLSTA PESVAAAPPA 
RRGALAARGE SNQIRLEEPR PIWLDSLPLP GGLVFRETPG EPSVEQELDI EPEEPGEPVD 
NLAEATADET YALPPPMPEP GYSAVAPHIE ASLLRLLDGL SLPSSHQPQA EALRVRIDGS 
LNWYELVPVL DDLAVLVLSL ADSGQRDFEE YLRQLNERLE SFLGHLGDAH AGYTGVLDNA 
RGFDQTLREQ VSGLQASVQQ ATDLDSLKLA VDSRLNGLLA SMDEHQREQA EHEQEVSGRL 
QALMERVNSM EQDAKAFHTH LEDQRQKALT DPLTGLPNRA ALSERLEQEV ARRRRDGGEL 
LLAVLDIDHF KRINDDFGHL AGDKVLKIIA GELRKRLRQA DFIARFGGEE FVVLLPATPL 
DAGRQLLERL RAAIAACPFH FKGEPLSITC SAGITAFVGN EAGEAAFERA DQALYRAKRA 
GRDRLEVA