Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_6243 |
Symbol | gmd |
ID | 5356681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 6456994 |
End bp | 6457965 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640815287 |
Product | GDP-mannose 4,6-dehydratase |
Protein accession | YP_001351554 |
Protein GI | 152986106 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1089] GDP-D-mannose dehydratase |
TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.21276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAAGAA ATGCACTGGT AACTGGGATC ACCGGTCAGG ACGGAGCGTA CCTGGCCAAG CTGCTGCTGG AAAAAGGCTA TCGCGTCCAT GGCCTGGTGG CGCGGCGCAG CAGCGACACG CGCTGGCGCC TGCGCGAACT GGGGATCGAG GACGACATCC AGTACGAGGA CGGCGACATG GCCGACGCCT GTTCGGTGCA GCGCGCGGTG ATCAAGGCCC AGCCGCAGGA GGTCTACAAC CTGGCGGCGC AGAGCTTCGT CGGTGCCTCC TGGAACCAGC CGGTGACCAC CGGCATCGTC GACGGCCTGG GGGTGACCCA CCTGCTCGAG GCGATCCGCC AGTTCAGCCC GGAAACGCGC TTCTACCAGG CCTCCACCAG CGAAATGTTC GGCCTGATCC AGGCCGAGCG CCAGGACGAG AACACGCCGT TCTACCCGCG CAGCCCCTAT GGCGTGGCCA AGCTCTATGG CCACTGGATC ACCGTCAACT ACCGCGAAAG CTTCGGCCTG CACGCTTCCA GCGGCATTCT CTTCAACCAT GAGTCGCCGC TACGCGGCAT CGAGTTCGTC ACGCGCAAGG TCACCGACGC CGTGGCCCGC ATCAAGCTCG GCAAGCAGCA GGAATTGCGC CTGGGCAACG TCGACGCCAA GCGCGACTGG GGCTCCGCCG GGGACTACGT CGAAGCCATG TGGCTGATGC TGCAGCAGGA AAAGGCCGAC GACTACGTGG TAGCCACCGG CGTCACCACC ACCGTGCGCG ACATGTGCCA GATCGCCTTC GAGCACGTGG GCCTGGACTA TCGCGACTTC CTCAGGATCG ACCCGGCGTT CTTCCGGCCC GCCGAGGTCG ACGTCCTCCT GGGCAACCCG GCCAAGGCCC AGCGCGTGCT CGGCTGGAAA CCCAGGACCA GCCTGGAAGA GCTGATCCGG ATGATGGTCG AGGCGGACCT GCGACGCGTA GACCGGGAGT GA
|
Protein sequence | MTRNALVTGI TGQDGAYLAK LLLEKGYRVH GLVARRSSDT RWRLRELGIE DDIQYEDGDM ADACSVQRAV IKAQPQEVYN LAAQSFVGAS WNQPVTTGIV DGLGVTHLLE AIRQFSPETR FYQASTSEMF GLIQAERQDE NTPFYPRSPY GVAKLYGHWI TVNYRESFGL HASSGILFNH ESPLRGIEFV TRKVTDAVAR IKLGKQQELR LGNVDAKRDW GSAGDYVEAM WLMLQQEKAD DYVVATGVTT TVRDMCQIAF EHVGLDYRDF LRIDPAFFRP AEVDVLLGNP AKAQRVLGWK PRTSLEELIR MMVEADLRRV DRE
|
| |