| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_6232 |
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| Symbol | |
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| ID | 5357959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 6441940 |
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| End bp | 6444795 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640815276 |
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| Product | hypothetical protein |
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| Protein accession | YP_001351543 |
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| Protein GI | 152984740 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTCC ATGTCGAGCC CTTGGCGCTG CCGGGCGGCA GCACCGATGT ACTGCGGCTC
TATGCCCGTG AAATCGCCAT CGAGCGTACC CGGCTCCTCT ACCTCGGCTC GCGCACGCCG
ACCCTGCTCA TGCTGCTCGG CGGTGCGACC AGCGCCTGCC TGGTGTGGGG CAAGGTCAGC
AGTTGGCTGC TCGGCGGCTG GCTGGTCTGG CTGGTGTTGC TCGCCGTGCT GCGCCTGCTG
CAAGTCGCCG CCTTCCAGCG AGCCGACAGC CGTCGCCAGG CCAGCCGCCA CTGGCGACGG
ACTTTCCTGC TCGGCGCCGG CGCTTCGGGC CTGACCCTGG CGTTGGCGGT GATCATGCTG
GTCCCGGCCG ATGCCTTCCT CCAGCAGGTG CTGGTGTTCG GCCTGGCGGC GGCGGCGATC
CTTTCCGCCA GCGTCGCCTA TGCGGTGAGC CTGCCGGCCT TCCTCAGCTT CGCCTTGCCG
GGGCTGTTGC CGTCGATCGG CTTCCTGCTG CTGCAGCCGC ACAGCCTGCT GCAGGGCTGG
GGCATGCTCG GCCTGATCCT GCTGGTGGCC TTGCTGGTGG TCGCCGGGCA GATCCACCGG
CTGGTGCAGG GCGCGCTGCT GCGACGCTTC CAGACCCAGG CGCTGAACCT GCACCTGGAG
CGCGCCAACG CCGAGGCCGA GGCGCTCAAC CGCAAGCTCG CCCAGGAGGT CGGCCAGCGA
CGCCTGGTCG AACGCGAGCT GCGCGCCGCC CGCGATGCGT TGCAGCGCCG GGTGGAGGCG
CGCACCGAGG AGCTTGGCGC GACCAGCCAG GCGCTCAGCC AGAGCGAGGC GCGCCTGGCC
ATGGCCCTGG AGGCCAGCGA GCTGGGGTTG TGGGACTGGG ACCTGGAGAG CGGCCGGGTC
CAGCATTCCC ATCTCGAAGC GATCTTCAGC GACGCCGGAG ACGGTCCCGG GGACTATCGC
AGGCTGATCG AAAACATCCA CCCCGGCGAC CTGCCGCGCA TCCGTCGCGC CCTCGCCGAA
CATCTAAAGG GACGCAGCGA GCTATACCGG GTGGAGTACC GCGTGCGCGG CCGGGAGGGC
GGCTGGCGCT GGCTGGAGGA TCGTGGCCGG GCCATGGCCC GCGACCCGCG GGGACGGGTG
ACGCGGATGC TCGGCACGCG CAGCGACATC AGCGCGCGCA AGCGCCTGGA AGAGCAGCAG
CAACTGGCCG CGACAGTGTT CGAGGCGGCC AGCGAGAGTA TCGTGATCCT CGATCCGGCC
TACAACCTGC TGGCGGTCAA CCAGGCCTTC AGTCGTATCA CCGGCTATCG CCGCGAGGAC
GTGGTCGGGC GCAACGCCAG CCTGCTGGTG AACACTCCCG AGGCCCAGCG CCACTACCGG
CAGATCCGCG CCGAGCTGCG CCAGCACGGG CAGTGGCAGG GCGAACTGGT GGATACGCGG
AAGAATGGCG ACCCTTATCC CCAATGGTTG CAGCTCAACC TGCTGCGCGA CGGCAACGGC
GAGGCGACCC ACATCGTCGG CTTCTTCACC GACCTCAGCG CTCGCCGCGA TGTGGAGGAG
CGCCTGCGCC ACCTGCTGCA CTACGACGAG CTGACCGGCC TGGCCAACCG CCGGCTGTTC
CGCGAGCGCC TGCACGAGGC GGCCCAGCGG GCGCGCCAGG AGGAGGGCGA GCTGGCCCTG
CTGCTGATCG ACCTGGACCG CTTCAAGCTG CTCAACGACA GCCTCGGCCA TGAAGTCGCC
GACCAGTTGC TCAGGGAGAT GGCCCGGCGC CTGCGGCGCA CCGCGCCGGA AGCGAACACC
CTGGCGCGCC TGGCCGGCGA CGAGTTCGCC ATCCTCCTCG ATGGCGGCAC CGGCGCCGCG
GCCCTGTCGC GCCTGGCCGA ACGCCTGCTG GCCCAGTTGC GCCAGCCGGT GAGCGTGCTC
GGCCACGAGC TGATCCTCGG CGCCTCGCTG GGAATCAGCC TGTTTTCCGA GCAGGCGCGG
GAAATCTCCG TGCTGATGAG CCAGGCGAAC CTGGCGATGC AACACGCCAA GCAGCTGGGC
GGCAACACCT TCCAGTTCTT CCGCGACAAC CTGCAGGACA GCACCCTCGA ACGCCTGCGC
CTGGAAAGCC GCCTGCGCAA GGCGATCGAG GAGGGCCAGC TGGACGTGCA TTACCAGCCC
AAGCTGTGCC TGGCCAGCGG CCGCCCGGAC TCGGCCGAGG CGCTGGTGCG CTGGCACCAT
CCGGAGGATG GCATGATCCC GCCGGCGACC TTCGTCGGCC TGGCCGAGGA GTGCGGGTTG
ATCGGCGAGA TCGGCGAGTT CGTCCTGCGC CGGGCCTGCC TGCAGGCCGC CGAGTGGAAC
GCGCGCGGCC TGTCCGTGAG GGTCTCGGTT AACCTCTCGG TGCACCAGCT GCGCCAGGGC
GACCTGCTCG AGGTGGTGCG CTCGGCGCTG GCCGACAGCG GCCTGCCGGC GGCGCAACTG
GAGCTGGAAC TGACCGAGAG CCAGTGGCTG GACGCCCTCG ACAGCGTCCT GGCGACCTTC
CGCCAGTTGC GCGAGATGGG CGTGAAGCTG TCGATCGACG ATTTCGGCAC CGGCTACTCC
TCGCTCAGCT ACCTGAAGCG CCTGCCGCTG GACTACCTGA AGATCGACCA GTCGTTCGTC
CGCGACCTGA CCCAGAACGG CGAGGACGCG GCGATCATCC GGGCGATCAT CGCCATGGCC
CACAGCCTTG ACCTGAAAGT GGTCGCCGAA GGCGTGGAAA CCACGGAGCA GCGGGACTTC
CTGGTGGCCC AGCGCTGCGA CGAGTTGCAG GGCTACCTGA TCGGCCGGCC GCTACCGGCC
CACGCGGTGG AAGAAGGTTT GCGCCAGGCT CGTTGA
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| Protein sequence | MTFHVEPLAL PGGSTDVLRL YAREIAIERT RLLYLGSRTP TLLMLLGGAT SACLVWGKVS
SWLLGGWLVW LVLLAVLRLL QVAAFQRADS RRQASRHWRR TFLLGAGASG LTLALAVIML
VPADAFLQQV LVFGLAAAAI LSASVAYAVS LPAFLSFALP GLLPSIGFLL LQPHSLLQGW
GMLGLILLVA LLVVAGQIHR LVQGALLRRF QTQALNLHLE RANAEAEALN RKLAQEVGQR
RLVERELRAA RDALQRRVEA RTEELGATSQ ALSQSEARLA MALEASELGL WDWDLESGRV
QHSHLEAIFS DAGDGPGDYR RLIENIHPGD LPRIRRALAE HLKGRSELYR VEYRVRGREG
GWRWLEDRGR AMARDPRGRV TRMLGTRSDI SARKRLEEQQ QLAATVFEAA SESIVILDPA
YNLLAVNQAF SRITGYRRED VVGRNASLLV NTPEAQRHYR QIRAELRQHG QWQGELVDTR
KNGDPYPQWL QLNLLRDGNG EATHIVGFFT DLSARRDVEE RLRHLLHYDE LTGLANRRLF
RERLHEAAQR ARQEEGELAL LLIDLDRFKL LNDSLGHEVA DQLLREMARR LRRTAPEANT
LARLAGDEFA ILLDGGTGAA ALSRLAERLL AQLRQPVSVL GHELILGASL GISLFSEQAR
EISVLMSQAN LAMQHAKQLG GNTFQFFRDN LQDSTLERLR LESRLRKAIE EGQLDVHYQP
KLCLASGRPD SAEALVRWHH PEDGMIPPAT FVGLAEECGL IGEIGEFVLR RACLQAAEWN
ARGLSVRVSV NLSVHQLRQG DLLEVVRSAL ADSGLPAAQL ELELTESQWL DALDSVLATF
RQLREMGVKL SIDDFGTGYS SLSYLKRLPL DYLKIDQSFV RDLTQNGEDA AIIRAIIAMA
HSLDLKVVAE GVETTEQRDF LVAQRCDELQ GYLIGRPLPA HAVEEGLRQA R
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