Gene PSPA7_6172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_6172 
Symbol 
ID5357418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp6377749 
End bp6378714 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content71% 
IMG OID640815216 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_001351483 
Protein GI152987820 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTTCG TCACCGAGAT CAAGACCTTC GCCGCCCTCG GCAGCGGCGT CATCGGCAGC 
GGCTGGATCG CCCGCGCCCT GGCCCATGGC CTCGACGTCG TCGCCTGGGA TCCGGCGCCG
GGCGCTGAAG CGGCGTTGCG CGCGCGCGTC GCCAACGCCT GGCCGGCCTT GCGCAAGCAG
GGCCTGGCGC CCGGTGCGGC GCAGGAGCGC CTGCGCTTCG TCGCCAGCAT CGAGGAATGC
GTGGGCGACG CCGATTTCGT CCAGGAGAGC GCCCCCGAGC GGCTCGACCT GAAGCTCGAC
CTGCACGCCC GGATCAGCGC TGCGGCGCGG CCCGACGTGC TGATCGGCTC GTCCACCTCG
GGCCTGCTGC CCAGCGAGTT CTACGCCGAG GCGAGCCACC CAGAGCGCTG CCTGGTCGGC
CACCCGTTCA ACCCAGTCTA CCTGCTGCCG CTGGTGGAGG TGGTCGGTGG CGAACGCACC
GCTGCCGAGG CCGTGCGGGC GGCGATGCGG GTCTACGAAT CGCTGGGCAT GCGTCCGCTG
CACGTACGCA AGGAAGTGCC CGGCTTCATC GCCGACCGCC TGCTCGAGGC GCTCTGGCGC
GAGGCGTTGC ACCTGGTCAA CGACGGCGTG GCCACGACCG GCGAGATCGA CGATGCGATC
CGCTTCGGCG CCGGCCTGCG CTGGTCGTTC ATGGGCACTT TCCTGACCTA CACCCTGGCC
GGCGGCAACG CCGGCATGCG CCACTTCATG GCGCAGTTCG GGCCGGCGCT GCAACTGCCC
TGGACCTACC TGCCGGCGCC GGAACTCACC GAAGCCCTGA TCGACCGGGT GGTGGAGGGT
ACCGCCGGGC AGCAGGGCGC GCGCAGCATC GCCGAACTCG AACGCTACCG CGACGACTGC
CTGCTGGCGG TGCTCGGGGC GATCAGGGAA ACCAAGGCCC GGCACGGCTT CGCCTTCGCC
GAATGA
 
Protein sequence
MSFVTEIKTF AALGSGVIGS GWIARALAHG LDVVAWDPAP GAEAALRARV ANAWPALRKQ 
GLAPGAAQER LRFVASIEEC VGDADFVQES APERLDLKLD LHARISAAAR PDVLIGSSTS
GLLPSEFYAE ASHPERCLVG HPFNPVYLLP LVEVVGGERT AAEAVRAAMR VYESLGMRPL
HVRKEVPGFI ADRLLEALWR EALHLVNDGV ATTGEIDDAI RFGAGLRWSF MGTFLTYTLA
GGNAGMRHFM AQFGPALQLP WTYLPAPELT EALIDRVVEG TAGQQGARSI AELERYRDDC
LLAVLGAIRE TKARHGFAFA E