| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_6160 |
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| Symbol | betT1 |
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| ID | 5354811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 6365462 |
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| End bp | 6367066 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640815204 |
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| Product | choline transporter BetT |
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| Protein accession | YP_001351471 |
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| Protein GI | 152987363 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACTG CTTCGCCAAT AAAAACAAAC GAGCAGGTAC GTCTGAACCC GATCGTGTTC
TTCGGCTCGA CCGCACTGAT CCTGGTTCTG ACCGCCGCCC TCATCCTCTA TCCCGATAGC
GCCGGAGCCT TGCTCGGCCG CATCCAGGCG TGGCTGTCGC ACAGCTTCGG CTGGTACTAC
ATGCTGGCCA TCGGTGCCTA CCTGTTCTTC GTGGTCTGGA TCGCCTTCTC GCGCTTCGGC
ACCCTCAAGC TCGGCGAGGA CCACGAGAAG CCGGACTTCA GCTACGGCGC CTGGGCCGGC
ATGCTGTTCT CCTCCGGGAT CGGCATCTCG CTGCTCTACT TCGCCGCCTC CGAGCCGATC
GACCACCTCT ACCACCCACC CGAAGGCGTT CCCGGCAGCC CTCAGGCGGC GCGCCAGGCG
CTGCAACTGA CCTTCCTCCA CTGGGGCCTG CACGGCTGGG CGATCTATGC CCTGGTCGGC
CTCGCCGTCG GTTACTTCGC CTACCGCCAT CGCCAGCCGC TGGCGTTGCG CTCGGCGCTC
TATCCGATCC TCGGCGAACG CTGGGTGAAA GGTGCCGCGG GCCACGCGGT GGATTGCTTC
GGTATCTTCG TCACCCTCCT CGGGCTGGTG ACCAACCTGG GCATCGGCGC CCTGCAGGTG
TCGTCCGGTC TCGAGTACCT CACCGGCATC CCGCACAGCA AGGGCACCCT GCTGGCGGTG
ATCCTGGTGA TGAGCCTGGT CGCCACCCTG GCGGCGGTGT CCGGCATCGA GAAAGGCATC
CGCCGGCTGT CCAACCTGAA CATCGTGCTG TTCAGCTCGC TGCTGGTGTT CGTGCTGGTC
TGCGGTTCGA CCCTGGAACT GCTCAACGGC TTCGTGCAGA ACCTCGGCGA CTATCTCGAC
GGCCTGGTGC TGAAGACCTT CGACCTCTAC GTCTACACCG GCGCCGGCGC TGGCAAGAGC
GAGGAATGGC TGGGCCTGTG GACCCTGTTC TACTGGGCCT GGTGGATTTC CTGGGCGCCC
TTCGTCGGCA TGTTCATCGC CCGCATCTCC CGGGGCCGCA GCGTACGCGA ACTGGTCTGC
GGGGTACTGC TGATCCCGCT GGGCTTCACC CTGGCCTGGC TGTCGGTATT CGGCAACAGC
GCCCTGGATC TGGTGATGAA CCACGGCGCG ACCGACCTCG GCAAGGCCGC GCTGGAGCAG
CCGTCTATGT CGATCTACCT GCTGCTGGAA CACTATCCGC TGTCGAAGAT CGTCATCGGC
CTGTCGATCT TCGTCGGCTT CGTGCTGTTC CTCACCCCGG CGGATTCCGG CTCGGTGATG
CTGGCCAATC TCTCGCGCAG CGGCGGCGAG TTGGACGAGG ACGCGCCGAA CTGGCTGCGT
ATCCTCTGGT CGGCCGTCGT CACGCTAGTC ACCATCGGCC TGCTGTTCGC CGGCAACTTC
ACGGCGATGC AGACCGTCGT GGTGCTCGCC GGCCTGCCGT TCTCGGCGGT GCTGATCCTG
TTCATGTTCG GCCTGCACAA GGCCATGCGC GCCGACTACG AGGCCCAGGT CGGCGACCGC
CGCACCTACC AGCCGGTGCC GGCGCCAACC CAGCCGCAGA CCTGA
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| Protein sequence | MSTASPIKTN EQVRLNPIVF FGSTALILVL TAALILYPDS AGALLGRIQA WLSHSFGWYY
MLAIGAYLFF VVWIAFSRFG TLKLGEDHEK PDFSYGAWAG MLFSSGIGIS LLYFAASEPI
DHLYHPPEGV PGSPQAARQA LQLTFLHWGL HGWAIYALVG LAVGYFAYRH RQPLALRSAL
YPILGERWVK GAAGHAVDCF GIFVTLLGLV TNLGIGALQV SSGLEYLTGI PHSKGTLLAV
ILVMSLVATL AAVSGIEKGI RRLSNLNIVL FSSLLVFVLV CGSTLELLNG FVQNLGDYLD
GLVLKTFDLY VYTGAGAGKS EEWLGLWTLF YWAWWISWAP FVGMFIARIS RGRSVRELVC
GVLLIPLGFT LAWLSVFGNS ALDLVMNHGA TDLGKAALEQ PSMSIYLLLE HYPLSKIVIG
LSIFVGFVLF LTPADSGSVM LANLSRSGGE LDEDAPNWLR ILWSAVVTLV TIGLLFAGNF
TAMQTVVVLA GLPFSAVLIL FMFGLHKAMR ADYEAQVGDR RTYQPVPAPT QPQT
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