| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_6132 |
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| Symbol | glcD |
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| ID | 5358888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 6336096 |
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| End bp | 6337595 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640815176 |
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| Product | glycolate oxidase subunit GlcD |
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| Protein accession | YP_001351448 |
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| Protein GI | 152983929 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATCC TCTACGACGA GCGTCTGGAC GGTCCGTTGC CGCAGGTGGA CAGGGATGCC
CTGCTGGCCG AATTGCGCCT CCGCCTGCCC GACCTCGAGC TGCTGCACGC CGCGGAAGAC
CTGCGTCCCT ACGAGTGCGA CGGTCTCTCG GCGTATCGCT GCACGCCGTT GCTGGTGGCA
TTGCCGGAAC GTATCGAACA GGTCCAGGGC CTGCTCGCCC TCTGCCGTCG GCTGAAGGTG
CCGGTGGTGG CGCGCGGTGC CGGCACCGGC CTGTCCGGCG GCGCGCTGCC GCTGGAGAAC
GGCGTGCTGC TGGTGATGGC GCGTTTCCGG CGGATCCTCG AGATCGACCC GCTGGGGCGT
TTCGCCCGGG TCCAGCCTGG CGTGCGCAAC CTGGCGATCT CCCAGGCCGC TGCCCCCCAC
GGCCTGTACT ACGCACCGGA CCCATCCTCG CAGATCGCCT GCTCCATCGG CGGCAACGTC
GCGGAGAACG CAGGCGGCGT GCATTGCCTG AAGTATGGCC TGACCGTGCA CAACCTGTTG
CAGGTGGACA TCGTGACCCT GGAGGGCGAG CGCCTGAGCC TGGGTTCCGC CGCCCTGGAC
AGCGCCGGCT TCGATCTGCT GGCGCTGTTC ACCGGCTCCG AAGGGCTGCT TGGCGTGGTG
GTGGAGGTCA CCGTCAGGCT GTTGCCGCGG CCGCCGCTGG CCAAGGTGCT GCTGGCCAGC
TTCGACGATG TGGAAAGCGC AGGGCGGGCG GTGGCCGACC TGATCGGCGC CGGCATCGTC
CCGGCTGGCC TGGAGATGAT GGACAACCTG TCGATCCGCG CCGCCGAGGA CTTCATCCAT
GCCGGCTACC CGGTCGACGC GGCGGCGATC CTGCTCTGCG AACTGGACGG AGTGGAAGCC
GACGTGCACG AGGATTGCGA ACGGGTCCGC GAGCTGTTCC AGGCGGCCGG CGCCACCTCG
GTGCGCCAGG CCCATGACGA GGCCGAGCGC CAGCGCTTCT GGGCCGGGCG CAAGAATGCC
TTTCCGGCGG TGGGGCGGAT TTCCCCCGAC TACTACTGCA TGGACGGCAG CATCCCGCGC
CGCGAGCTGC CGCGGGTGCT GCACGGCATC GCCGAGCTTT CGCGCGAATA CGGCCTGCGG
GTGGCCAACG TATTCCATGC CGGCGACGGC AACATGCACC CGTTGATCCT CTTCGACGCC
AACCTGCCGG GCGAGCTGGA GCGCGCCGAG GCGCTGGGCG GCAGGATCCT CGAGCTGTGC
GTGGCGGTAG GCGGCAGCAT CACCGGCGAA CATGGCGTCG GCCGCGAGAA GATCAACCAG
ATGTGCGCTC AGTTCAATGC CGACGAGCTG ACCCTGTTCC ACGCCGTGAA GGCGGCGTTC
GACCCGGCCG GGCTGCTCAA TCCCGGCAAG AACGTGCCCA CCCTGCATCG CTGCGCCGAG
TTCGGCGCCA TGCACGTCCA CCACGGTCGA CTGCCGTTCC CCGAACTGGA GCGTTTCTGA
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| Protein sequence | MNILYDERLD GPLPQVDRDA LLAELRLRLP DLELLHAAED LRPYECDGLS AYRCTPLLVA
LPERIEQVQG LLALCRRLKV PVVARGAGTG LSGGALPLEN GVLLVMARFR RILEIDPLGR
FARVQPGVRN LAISQAAAPH GLYYAPDPSS QIACSIGGNV AENAGGVHCL KYGLTVHNLL
QVDIVTLEGE RLSLGSAALD SAGFDLLALF TGSEGLLGVV VEVTVRLLPR PPLAKVLLAS
FDDVESAGRA VADLIGAGIV PAGLEMMDNL SIRAAEDFIH AGYPVDAAAI LLCELDGVEA
DVHEDCERVR ELFQAAGATS VRQAHDEAER QRFWAGRKNA FPAVGRISPD YYCMDGSIPR
RELPRVLHGI AELSREYGLR VANVFHAGDG NMHPLILFDA NLPGELERAE ALGGRILELC
VAVGGSITGE HGVGREKINQ MCAQFNADEL TLFHAVKAAF DPAGLLNPGK NVPTLHRCAE
FGAMHVHHGR LPFPELERF
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