| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_6103 |
|---|
| Symbol | |
|---|
| ID | 5356537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 6312241 |
|---|
| End bp | 6313635 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640815147 |
|---|
| Product | putative oxidoreductase |
|---|
| Protein accession | YP_001351419 |
|---|
| Protein GI | 152988913 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01679] FAD-linked oxidoreductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.46461 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGCC ACCTGTCACG ACGCCAGCTC CTGCAGCGGG CGGGGGCGCT CGGCGCCTTC
GCCGCCCTGG CGGGCAATCC CGCGTTGGCC GAACTGCTTC GGGCGCCGCG CCTGATTCCC
TGGCGCAACT GGTCCGGCGC GCAAAGCTGC CTGCCCCTTG CGCGGGAAGC GCCGAAGGAC
CTCGACGAAC TGCTCCGGGT GATCCGCGAG GCTCCCGGGA AAATCCGCCC CGTGGGTTCC
GGCCACTCCT TCAGCGCGCT GGTGCCGACC GATGGCACCC TGCTGTCCCT GGCCTACTTC
AGCGGCCTGC TCGGTCACGA CGGCGACACC CTGCAGGCCG AGTTCGGCGG CGGTACGCCG
ATGTCGCAGA TGGGCGCGCC GCTCAAGGAG ATCGGCCAGG CGCTGGTGAA CATGGCCGAT
ATCGACTACC AGACCCTGGC CGGCGCCATC GCCACCTCGA CCCACGGCAC CGGGGTCGGC
TTCGGTTCCT ATTCCGCCCA GGTCCGCGGC CTGCAGCTGG TCAGCGCCAG CGGCGAGGTG
TTCGACTGCG ACGCCGCGCG CCACCCCGAG GTGTTCGACG CCGCGCGGGT CTCCCTCGGC
GCGCTGGGCG TGGTGACCCG GGTGCGCCTG CAGAACCGCG CGGCCTATCG CCTGCGCGAG
CGGCAGTGGA TCGCCAGGAC CGAGGAGCTG CTGGAGGACG TGGAGAAGAA CACCCGCGAG
AACCAGCATT GGGAGATGCT GGTGGTCACC CATTCCGACT ATGCCCTGTC GATCGCCCTC
AACGAGACCG AGGAGCCGAA GACCCCGCCG CCGGACCCGG AGGAGGAGGG CGGCAACCAG
TTCGTCAGCC TCATCGAGGG GCTCGACAAG TACGTCAGCG ACTTCCCCGA GACCCGCCGC
ACCCTGCTCA ACAGCCTGCG CCATTTCGCC CGTTTCGACG AGCGGGTCGA CGACTCCTAC
GCGGTCTACG CCAATGTGCG CAACGTGCGC TTCAACGAGA TGGAGTATTC GGTGCCCGCC
GAGCACGGCC CGGCCTGCCT GCGCGAGATC CTCGCGCTGA TCCGCGGCAA GGACCTGCGT
ACCTGGTTCC CCATCGAGTA CCGCTACGTG AAGGCCGACG ACATCCCCCT GAGCATGTTC
GAGGGCCGCG ACAGCTGTTC CATTTCCGTG CACCAGCACT ACAGCATGGA CCATCACAAC
TTCTTCGCCG CGGTGGAGCC GATCTTCTGG AAGTACGCCG GGCGACCGCA CTGGGGCAAG
CTGCATGGCC TCAACGCGCG CCAGTTGCAG ACGCTCTACC CGCGCTGGCG GGAGTTCGCC
GAGGTGCGCC AGGCGCTGGA CCCGGACGGC AAGTTTCTCA ATGCGCACCT CTCTTCCATC
CTGGGCGTGA CCTGA
|
|---|
| Protein sequence | MPSHLSRRQL LQRAGALGAF AALAGNPALA ELLRAPRLIP WRNWSGAQSC LPLAREAPKD
LDELLRVIRE APGKIRPVGS GHSFSALVPT DGTLLSLAYF SGLLGHDGDT LQAEFGGGTP
MSQMGAPLKE IGQALVNMAD IDYQTLAGAI ATSTHGTGVG FGSYSAQVRG LQLVSASGEV
FDCDAARHPE VFDAARVSLG ALGVVTRVRL QNRAAYRLRE RQWIARTEEL LEDVEKNTRE
NQHWEMLVVT HSDYALSIAL NETEEPKTPP PDPEEEGGNQ FVSLIEGLDK YVSDFPETRR
TLLNSLRHFA RFDERVDDSY AVYANVRNVR FNEMEYSVPA EHGPACLREI LALIRGKDLR
TWFPIEYRYV KADDIPLSMF EGRDSCSISV HQHYSMDHHN FFAAVEPIFW KYAGRPHWGK
LHGLNARQLQ TLYPRWREFA EVRQALDPDG KFLNAHLSSI LGVT
|
|---|
| |