Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_6047 |
Symbol | |
ID | 5356660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 6246041 |
End bp | 6248407 |
Gene Length | 2367 bp |
Protein Length | 788 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640815091 |
Product | type I restriction-modification system subunit R |
Protein accession | YP_001351363 |
Protein GI | 152989289 |
COG category | [V] Defense mechanisms |
COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.494965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAGA AATCGCTTTC CGAGCGTGAT ATCTGCAGCA AATTCATTTC CCCTGCCATT GGTAACGCTG GCTGGGATTT GCATAAGCAG GTACGTGAGG AAGTCAGCTT CACCAAGGGA CGCATTATCG TGCGCGGCAA AATGCACAGC CGTGGCGAGT CGCGTCGAGC TGACTACATC CTCTATCACC AGCAGAACCT GCCCATTGCC GTCATCGAGG CGAAGGACAA CAAGCACTCG CTCGGCTCCG GCATGCAACA GGCCCTCGGC TATGCCGAAG CGCTCGACGT GCCGTTCGTG TTTTCCAGCA ATGGCGATGG CTTTCTGTTC CATGATCGCA GCGGCACCGG CACGCAGGTT GAAACCGAGC TAGGGCTCGA CCAGTTTCCC AGCCCGGACG AGCTCTGGCA GCGGTATTGC CAATGGAAAG GCCTGGATGG CGCCGCTCGG CAAAAGATCG AGGCGCCTTA CTACGACGAC GGTTCCGGGC GCATGCCGCG CTACTACCAG ATGAATGCCA TCAACCGCAC GGTTGAGGCC GTAGCACGTG GCCAGGATCG CGTGCTGCTG GTGATGGCCA CCGGCACCGG CAAGACCTAC ACCGCGTTTC AGATCATCTG GCGGCTGTGG AAGTCGAAGC AGAAGAAACG CATCCTCTTC CTTGCCGATC GCAATATTCT GGTCGACCAG ACCAAGAACA ACGACTTCAA GCCCTTCGGC CAGGCGATGA CCAAGATCGC CAAGCGCCAG ATCGAGAAGT CCTACGAGAT CTACCTGTCG CTCTACCAGG CAGTAACTGG CTCTGAAGAA GAAAAGAACG TCTACAAGCA GTTCTCCCCG GATTTCTTTG ATCTGGTGGT GATTGACGAA TGCCACCGTG GCAGCGCTGC GGAAGATTCC GCCTGGCGCG AGATCCTCGA ATATTTTTCC AGCGCCACTC ACGTCGGCCT GACCGCCACG CCAAAGGAAA CCAAGGACGT TTCCAGCATC ACCTATTTCG GTGAGCCGGT GTACAGCTAC ACCTTGAAGC AAGGCATCGA GGACGGCTTC CTCGCCCCCT ATAAAGTGGT GCGCATCGAT TTCGACAAGG ACCTGCAGGG CTGGCGCCCT CCCAAGGGCA TGCTCGACAA GAACGGCGAG CTGATCGAGG ACCGCATCTA CGACCTCAAG GATATGGACC GCCATTTGGT CATCGAAGCG CGTACCCAGA TGGTGGCGCA GAAGGTCACC GAGTTCCTCA AGGCCACCGA CCCGTTCCAG AAGACCATCA TCTTCTGCGA TGACATCAAC CACGCCGAGC GCATGCGCCA GGCCCTGGTC AACCTCAATC CTGAGCGCAT CGCTGAGAAT CGCAAGTACG TCATGCGCAT CACCGGCGAC GACCAGGAAG GCAAGGCCGA GCTGGACAAC TTCATCAACC CGGAAGCGCG CTATCCGGTC ATCGCCACCA CCAGCAAGCT GATGACCACT GGCGTCGATG CCCAGACCTG CAAGCTCGTG GTGCTCGACC AGCACATCAA GTCGATGACC GAGTTCAAGC AGATCATCGG GCGCGGCACG CGCATCAACG AGGACTACGG CAAGTTCTGG TTCACCATCA TGGACTTCAA GAAAGCCACC GAGCTGTTCG CCGATCCAGC CTTCGATGGC GAACCCGTGG TGATCTACAG CCCTGAAGGC GATGACTCGC CCGTGCCGCC AGATAGTCCT CTGGCGGATG AGGAAGGCAT CGTCGACGGT GGCGATTGGC TGCCCGAGGG CGACGAAACC GATGGCGGCG AAGAGGGCAA AAAGCGTATC AAGTACGTGA TCGACAACGT GCCGATCCAC GTTATTGCAG AGCGCGTGCA GTACTACGGG CCGGACGGCA AGCTGATCAC CGAATCGCTG CGCGACTACA CCCGCAGCTG CGTGAAAAAG CAGTTTGCCT CGCTGGATGA CTTCCTGCGC CGCTGGACGG ATGCCGAGCA GAAGAAGGCC ATCATCGACG AGCTCGCCGC TCAAGGTGTG ATGTGGGAAG CCCTGGACGA GGAAGTACAG GCCAAGCGCG GCCAGCCGCT CGACCCCTTC GACCTGATCT GCCATATCGC CTTCGACCAA CCGCCGCTGA CCCGCAAGGA GCGCGCCGAA CAGGTGAAAA AACGCAACTA CTTCGCCAAA TACTCCGGCG CCGCCCGCCA GGTGCTGGAG GCCTTGTTGG ACAAGTACGC CGACACCGGC ATCGAGCACA TCGAAGACAT AAAGATTCTC CAGCTCGATC CTTTCAGCCA GATCGGTGCG CCAGTTGAGT TGGTCAGGGC GTTTGGCGGT AAGCCTGGTT ATCAGCAGGC GATTCAGGAG TTGGAGAGTG AGCTCTATGC ATCCTGA
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Protein sequence | MDKKSLSERD ICSKFISPAI GNAGWDLHKQ VREEVSFTKG RIIVRGKMHS RGESRRADYI LYHQQNLPIA VIEAKDNKHS LGSGMQQALG YAEALDVPFV FSSNGDGFLF HDRSGTGTQV ETELGLDQFP SPDELWQRYC QWKGLDGAAR QKIEAPYYDD GSGRMPRYYQ MNAINRTVEA VARGQDRVLL VMATGTGKTY TAFQIIWRLW KSKQKKRILF LADRNILVDQ TKNNDFKPFG QAMTKIAKRQ IEKSYEIYLS LYQAVTGSEE EKNVYKQFSP DFFDLVVIDE CHRGSAAEDS AWREILEYFS SATHVGLTAT PKETKDVSSI TYFGEPVYSY TLKQGIEDGF LAPYKVVRID FDKDLQGWRP PKGMLDKNGE LIEDRIYDLK DMDRHLVIEA RTQMVAQKVT EFLKATDPFQ KTIIFCDDIN HAERMRQALV NLNPERIAEN RKYVMRITGD DQEGKAELDN FINPEARYPV IATTSKLMTT GVDAQTCKLV VLDQHIKSMT EFKQIIGRGT RINEDYGKFW FTIMDFKKAT ELFADPAFDG EPVVIYSPEG DDSPVPPDSP LADEEGIVDG GDWLPEGDET DGGEEGKKRI KYVIDNVPIH VIAERVQYYG PDGKLITESL RDYTRSCVKK QFASLDDFLR RWTDAEQKKA IIDELAAQGV MWEALDEEVQ AKRGQPLDPF DLICHIAFDQ PPLTRKERAE QVKKRNYFAK YSGAARQVLE ALLDKYADTG IEHIEDIKIL QLDPFSQIGA PVELVRAFGG KPGYQQAIQE LESELYAS
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