| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_6045 |
|---|
| Symbol | |
|---|
| ID | 5359631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 6243211 |
|---|
| End bp | 6244680 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640815089 |
|---|
| Product | type I restriction-modification system subunit M |
|---|
| Protein accession | YP_001351361 |
|---|
| Protein GI | 152987952 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0475301 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATCA GCAGCACCAT CAAATCCATC CAGGACATCA TGCGCAAGGA TGTCGGCGTC
GACGGCGACG CCCAGCGCAT CGGCCAGCTC GTGTGGATGC TGTTCCTCAA GATCTTCGAT
GACCGCGAGC AGGAGTGGGA ACTGCTGGAT GACGCCTATC GCTCGCCGAT TCCGGAAAGC
TGCCGCTGGC GCACCTGGGC GGCCGACCCG GAAGGCATTA CTGGTGACGA GCTGAAGAAC
TTCATCGACA ACAACCTGTT CCCGCAGCTG CAGAACCTCC ACGAATACAG CACCACTCCA
GCCGCCTACG TGGTGCGTGG CGTATTCGAG GATGCCTACA ACTACATGAA ATCCGGCCAG
CTTATCCGCC AGGTGATCAA CAAGATCCAG GAGGGCGTGG ACTTCAACAA GGCGCAAGAG
CGTCATGCCT TCGGCGACAT GTACGAGCAG TTGCTGCGCG ACCTGCAGAA TGCCGGCAAC
GCCGGTGAGT TCTACACGCC GCGCCCGGTC ACCGAATTTA TGGTGCGCAT GGTCGACCCC
AAGCTGGACG AGAAGGTCAT GGACCCGGCC TGCGGCACTG GCGGCTTCCT TACCTGCACC
ATCGAGCACA AGCGCAGCCG CTATGTGAAA ACTGCCGAGG ACGAGCGCGT ACTGCAGGCC
AGCATCTTCG GCGTTGAGAA AAAGCCGCTG CCGCACCTGC TGGCCACCAC CAACATGATC
CTGCACGGCA TCGAGGTGCC CAGCCAGATC AAACACGACA ACACCCTGAG CCGCCCGCTG
ATCAGCTGGG GGCCGGGCGA GCGGGTCGAC TGCATCGTCG CCAACCCGCC GTTCGGCGGC
ATGGAGGAAG ATGGTATCGA AACCAACTTC CCCGCCGCCT TCCGCACCCG GGAAACCGCC
GATTTGTTCC TGGTGCTGAT CATGCACCTG CTCAAGGACG GTGGCCGCGC CGCCGTGGTC
CTGCCGGATG GCTTCCTGTT CGGCGAAGGC ATCAAGAGCC GCATCAAGGA AAAGCTACTC
ACCGAGTGCA ACCTGCACAC CATCGTTCGC CTGCCCAACG GCGTGTTCAA CCCCTACACC
GGCATCAAGA CCAACCTGCT GTTCTTTACC AAGGGCTCGC CGACCAAGGA GGTGTGGTTC
TACGAGCACC AGTACCCGGC CGGCTACAAG AGCTACTCCA AGACCAAGCC CATGCGCATC
GAGGAGTTCG CGGTCGAGGA AGCCTGGTGG GGCAGCGAGG CCGATGGCTT TGCCGCGCGG
GTGGAAAACG AGTTCGCCTG GAAGGTCAGC CTCGACGAGC TGAGGGCGCG CAACTGGAAC
CTGGACTGTA AGAACCCGCA TGTGGGCGAG CAGATCAGCC ACGATCCGGA GGAGCTGTTG
CGTAACTACG CGCAACTGCA AGGCGAGATC GGCGAGTTGC GCGCCCAGCT TAAGGCTATG
CTGGCCGAGG CTTTGGAGCG CCAGGTATGA
|
|---|
| Protein sequence | MSISSTIKSI QDIMRKDVGV DGDAQRIGQL VWMLFLKIFD DREQEWELLD DAYRSPIPES
CRWRTWAADP EGITGDELKN FIDNNLFPQL QNLHEYSTTP AAYVVRGVFE DAYNYMKSGQ
LIRQVINKIQ EGVDFNKAQE RHAFGDMYEQ LLRDLQNAGN AGEFYTPRPV TEFMVRMVDP
KLDEKVMDPA CGTGGFLTCT IEHKRSRYVK TAEDERVLQA SIFGVEKKPL PHLLATTNMI
LHGIEVPSQI KHDNTLSRPL ISWGPGERVD CIVANPPFGG MEEDGIETNF PAAFRTRETA
DLFLVLIMHL LKDGGRAAVV LPDGFLFGEG IKSRIKEKLL TECNLHTIVR LPNGVFNPYT
GIKTNLLFFT KGSPTKEVWF YEHQYPAGYK SYSKTKPMRI EEFAVEEAWW GSEADGFAAR
VENEFAWKVS LDELRARNWN LDCKNPHVGE QISHDPEELL RNYAQLQGEI GELRAQLKAM
LAEALERQV
|
|---|
| |