| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_6020 |
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| Symbol | lysA |
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| ID | 5354807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 6215891 |
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| End bp | 6217138 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640815064 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001351336 |
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| Protein GI | 152985290 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.422247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACAT TCAGTTACCG CGACGGCGAG CTGTTCGCGG AAGGGGTGGC GCTTTCCCGC
ATCGCCGAAC GTTTCGGCAC GCCCACCTAC GTCTATTCCC GCGCGCACAT CGAGGCGCAG
TACCGCGCCT ATGCCGACGC CCTCGCCGGC ATGCCGCACC TGGTCTGCTT CGCGGTCAAG
GCCAACTCCA ACCTCGGGGT GCTGAATGTG CTGGCGCGCC TCGGCGCCGG TTTCGACATC
GTCTCCCGCG GTGAGCTGGA GCGTGTCCTG GCGGCCGGCG GCGATCCGGC CAAGGTAGTG
TTCTCCGGCG TCGGCAAGAG CCGCGACGAC ATGCGCCGCG CCCTGCAGGT CGGCGTGCAC
TGCTTCAACG TCGAGTCCAG CGAGGAGCTG GAGCGCCTGC AACGGGTGGC CGCGGAACTC
GGCGTGAAAG CGCCGGTGTC GCTGCGGGTC AATCCGGACG TGGACGCCCA GACCCACCCC
TATATCTCCA CCGGCCTGAA AGAGAACAAG TTCGGCATCG CCATCGACGA GGCCGAGGCG
ATCTACGCCC GCGCCGCCGA GCTTGACCAC CTGGAAGTGA TCGGCGTCGA CTGCCACATC
GGCTCGCAAT TGACCCAGCT GGCGCCCTTC CTCGACGCCC TCGAGCGCCT GCTCGGGCTG
GTCGACCGCC TGGCCGCCAG GGGCATCGCC ATCCGCCACC TGGACCTGGG CGGCGGCCTC
GGCGTGCGCT ACCGCGACGA ACAGCCGCCG CTGGCTGGCG ACTACATCCG CGCCATCCGC
GAGCGCCTGC ACGGCCGCGA CCTTACCCTG GTGTTCGAGC CGGGCCGCTC GATCGTCGCC
AACGCCGGCG TGCTGCTGAC CCGCGTCGAG TACCTCAAGC ACACCGGGCA CAAGGACTTC
GCCATCGTCG ACGCGGCGAT GAACGACCTG ATCCGCCCGG CTCTCTACCA GGCCTGGATG
GACGTGCAGG CGGTACGCCC GCGCGACGCC GCGCCGCGCC GCTACGACCT GGTCGGGCCG
ATCTGCGAGA CTGGCGACTT CCTCGCCAAG GACCGCGAGC TGGCTCTCGC CGAGGGCGAC
CTGCTGGCGA TTCGTTCCGC CGGCGCCTAC GGCTTCGTCA TGAGCTCGAA CTACAACACC
CGCGGCCGCG CCGCCGAGGT GCTGGTGGAC GGCGAGCGAG CCCACGAGGT CCGTCGCCGC
GAGACCGTCC CAGAGCTCTA TGCCGGCGAA AGCCTGCTGC CGCAGTGA
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| Protein sequence | MDTFSYRDGE LFAEGVALSR IAERFGTPTY VYSRAHIEAQ YRAYADALAG MPHLVCFAVK
ANSNLGVLNV LARLGAGFDI VSRGELERVL AAGGDPAKVV FSGVGKSRDD MRRALQVGVH
CFNVESSEEL ERLQRVAAEL GVKAPVSLRV NPDVDAQTHP YISTGLKENK FGIAIDEAEA
IYARAAELDH LEVIGVDCHI GSQLTQLAPF LDALERLLGL VDRLAARGIA IRHLDLGGGL
GVRYRDEQPP LAGDYIRAIR ERLHGRDLTL VFEPGRSIVA NAGVLLTRVE YLKHTGHKDF
AIVDAAMNDL IRPALYQAWM DVQAVRPRDA APRRYDLVGP ICETGDFLAK DRELALAEGD
LLAIRSAGAY GFVMSSNYNT RGRAAEVLVD GERAHEVRRR ETVPELYAGE SLLPQ
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